Pairwise Alignments

Query, 348 a.a., putative glycine betaine/L-proline ABC transporter, periplasmic component from Pseudomonas putida KT2440

Subject, 344 a.a., histidine-binding periplasmic signal peptide protein from Sinorhizobium meliloti 1021

 Score = 82.0 bits (201), Expect = 2e-20
 Identities = 82/353 (23%), Positives = 141/353 (39%), Gaps = 40/353 (11%)

Query: 2   TRFLSRGLAGFALLAALVPATASFAKD--KIVIGEQNWTGAIAIQYILGDIISNRLDGEV 59
           T  L+   AG  L A+   A AS+  D   +     +W     I  ++  I+S   D +V
Sbjct: 5   TMRLTFAAAGLMLAASASGANASYCGDGKTVTFAGIDWESGAFITEVMKTILSKGYDCQV 64

Query: 60  SYLAGDLPILFAAAAKGDGSVDVLTDIWLPNQSAAFAKYVTGGTHSLIPNKQPYVGV-QG 118
             + G+   L  A A  D  V +  + WL  +S  + K V      +I   + +VG  +G
Sbjct: 65  DSIPGNSVTLEQATANND--VQIFAEEWL-GRSDVWNKAVE--EKKVIAVGKTFVGASEG 119

Query: 119 FYIPGYI----------QDKYNVKSVYDLKKPEVAKLFA-PLGGGKSQLLVGPAGWESTY 167
           +++P Y+              ++KSV  L  P++A++FA P    K + L  P+GW    
Sbjct: 120 WFVPDYVVHGDPARNIEAKAPDLKSVSQLTDPKIAEIFADPEEPSKGRFLNCPSGWTCEG 179

Query: 168 IGQIKAKDFGFDGNFESVSTEASVTY-AKLDAAYKAERGVIFYAYTPDWIFSAYDLRRLD 226
           +   K + +     + +          A + +AY     ++FY ++P  I   + L +L+
Sbjct: 180 VSTAKLEAYKLGETYVNFRPGTGTALDAAITSAYLQGEPILFYYWSPTAILGKFKLIQLE 239

Query: 227 EPPFDGYAQDNKKGDPLYKADGCWKFISPTVDADWLNKSSITCAYPDAKVHILASSALRQ 286
           EP ++               + CWK +S         K    CA+P   V    +S    
Sbjct: 240 EPAYN---------------EACWKELSSAN-----GKRDEGCAFPSVDVAYGVNSTFAS 279

Query: 287 RAPRIAAFLENVSIDPASLNDLILKIEREKQPADAAAKAWVAANQATVDRWLS 339
            AP I   LE  +     +N  +  +   K  A AAA  ++        +W+S
Sbjct: 280 EAPEIVEILEKATFPLDEVNASLAYMADNKVDATAAAAEFLKTKGDIWSKWVS 332