Pairwise Alignments

Query, 348 a.a., putative glycine betaine/L-proline ABC transporter, periplasmic component from Pseudomonas putida KT2440

Subject, 333 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 73.2 bits (178), Expect = 9e-18
 Identities = 79/317 (24%), Positives = 130/317 (41%), Gaps = 31/317 (9%)

Query: 30  IVIGEQNWTGAIAIQYILGDIISNRLDGEVSYLAGDLPILFAAAAKGDGSVDVLTDIWLP 89
           +VI   NW     +  I   I+ N          GD   +  +  +  G  D+  + WL 
Sbjct: 30  VVIANMNWQSIDVLANIDKIILENGYGCSAEITIGDTVSIMTSMIE-KGEPDIAPEAWLN 88

Query: 90  NQSAAFAKYVTGGTHSLIPNKQPYVGVQGFYIPGYIQDKY-NVKSVYD-LKKPEVAKLFA 147
                 ++ +  G      N     G+QG+YIP YI D +  +K+V D LK PE+    A
Sbjct: 89  ALPEIVSRGIAEGKLISAGNALSDGGIQGWYIPKYIADAHPEIKTVSDALKHPELFP--A 146

Query: 148 PLGGGKSQLLVGPAGW-ESTYIGQIKAKDFGFDGNFESVSTEASVTYAKLDAA----YKA 202
           P    K  ++ GP+GW  ST   Q+      +DG+ +        + A LD +    Y+ 
Sbjct: 147 PEDSSKGAVVNGPSGWGASTTTSQLYK---AYDGDAKGFVLVDPGSAAGLDGSIVKNYER 203

Query: 203 ERGVIFYAYTPDWIFSAYDLRRLDEPPFDGYAQDNKKGDPLYKADGCWKFISPTVDADWL 262
           + G   Y ++P  +   Y + +LD   FD          P   A+  WK  +  VD +  
Sbjct: 204 KIGWFGYYWSPTSLLGKYPMVKLD---FDA---------PHNAAE--WKRCNTVVDCE-- 247

Query: 263 NKSSITCAYPDAKVHILASSALRQRAPRIAAFLENVSIDPASLNDLILKIEREKQPADAA 322
                   +P  KV  L +   ++RA     +L+    D A+LN L+  +   +   + A
Sbjct: 248 --DPTVNDWPTDKVETLVTREFKERAGAAMDYLKTRRWDNATLNSLLAWMTDNQATGEDA 305

Query: 323 AKAWVAANQATVDRWLS 339
           A+ ++  N     +WLS
Sbjct: 306 ARYFLEKNPEIWTKWLS 322