Pairwise Alignments

Query, 348 a.a., putative glycine betaine/L-proline ABC transporter, periplasmic component from Pseudomonas putida KT2440

Subject, 343 a.a., Substrate-binding region of ABC-type glycine betaine transport system (NCBI) from Rhodospirillum rubrum S1H

 Score = 51.6 bits (122), Expect = 3e-11
 Identities = 66/291 (22%), Positives = 105/291 (36%), Gaps = 37/291 (12%)

Query: 57  GEVSYLAGDLPILFAAAAKGDGSVDVLTDIWLPNQSAAFAKYVTGGTHSLIPNKQPYVG- 115
           GE+ Y AG +     A A GD +   L   W P     + +   GG   L  +     G 
Sbjct: 75  GEIDYAAGHV-----ALANGDATF--LAAHWNPLHKDFYER--AGGDAKLYRDGVYSEGA 125

Query: 116 VQGFYIPGYIQDKYNVKSVYDLKKPEVAKLFAPLGGGKSQLLVGPAGWESTYIGQIKAKD 175
           +QG+ I     + + +  +  LK P++A LF   G GK+ L     GW    + +     
Sbjct: 126 LQGYLIDKKTAEAHAITRIDQLKDPKIAALFDHDGDGKADLAGCTPGWGCEAVIEHHLDA 185

Query: 176 FGFDGNFESVSTEASVTYAKLDAAYKAERGVIFYAYTPDWIFSAY----DLRRLDEPPFD 231
           +G            S   A     +K    V++Y +TP W+        D+  L + PF 
Sbjct: 186 YGLRKTVTHQQGSYSALMADTITRFKKGASVLYYTWTPYWVSGVLVPGRDVTWL-QVPFS 244

Query: 232 GYAQDNKKGDPLYKADGCWKFISPTVDADWLNKSSITCAYPDAKVHILASSALRQRAPRI 291
                 K  D        + F + T                     I+A+ A  +  P  
Sbjct: 245 ALPGSRKDVDTALATGQNYGFQANT-------------------QQIVANRAWAEANPAA 285

Query: 292 AAFLENVSIDPASLNDLILKIER-EKQPADAA--AKAWVAANQATVDRWLS 339
           A     + +  A +N   L++   E   AD A     W+A ++ T D WL+
Sbjct: 286 ATLFSLMRLPNADINAQNLRMRNGENSQADIARHVDGWIAGHRQTWDGWLA 336