Pairwise Alignments

Query, 348 a.a., putative glycine betaine/L-proline ABC transporter, periplasmic component from Pseudomonas putida KT2440

Subject, 321 a.a., putative glycine betaine transport system substrate binding protein from Phaeobacter inhibens DSM 17395

 Score =  183 bits (464), Expect = 6e-51
 Identities = 110/330 (33%), Positives = 169/330 (51%), Gaps = 21/330 (6%)

Query: 11  GFALLAALVPATASFAKDKIVIGEQNWTGAIAIQYILGDIISNRLDGEVSYLAGDLPILF 70
           GFA   ++  A  + A +++ IG  +WTGA AI ++LG ++  R+ G+V ++ G+   +F
Sbjct: 9   GFAATVSIF-AMPALAGEEVKIGVPSWTGAQAIAHLLGAVVEMRIGGKVEFVPGNNATIF 67

Query: 71  AAAAKGDGSVDVLTDIWLPNQSAAFAKYVT-GGTHSLIPNKQPYVGVQGFYIPGYIQDKY 129
            A  +G G +DV  D+WLPNQ +   KYV   GT +L  N  PY G QGF +     +  
Sbjct: 68  QAMDQGKGDIDVHPDVWLPNQQSFTQKYVDEAGTVTLSSN--PYEGNQGFCVSQDFGEAN 125

Query: 130 NVKSVYDLKKPEVAKLFAPLGGGKSQLLVGPAGWESTYIGQIKAKDFGFDGNFESVSTEA 189
           NV  + DL +P+VA L    G GK +L +G  GW S  + ++K +D+G     + V  E 
Sbjct: 126 NVTDIADLGRPDVAALMDSDGNGKGELWIGAPGWASANVNEVKTRDYGLLDFIDPVRAEE 185

Query: 190 SVTYAKLDAAYKAERGVIFYAYTPDWIFSAYDLRRLDEPPFDGYAQDNKKGDPLYKADGC 249
           SV  A++  +     G  FY Y P  ++  +D+R L EP FD                  
Sbjct: 186 SVKTARIKDSIAKGEGYAFYCYKPHAVWYMFDVRMLSEPTFDPEK--------------- 230

Query: 250 WKFISPTVDADWLNKSSITCAYPDAKVHILASSALRQRAPRIAAFLENVSIDPASLNDLI 309
           +  + P+ D DW +KSS+        V I  S++L  R+P IA F  N ++    ++   
Sbjct: 231 YTMVQPSDDPDWYDKSSVATKDALKNVQIAWSNSLEGRSPAIAEFFANFALTADDVSGFA 290

Query: 310 LKIE-REKQPADAAAKAWVAANQATVDRWL 338
            +I  + ++PAD  A+ WV AN   VD WL
Sbjct: 291 YEISGKGREPAD-VAREWVEANPDRVDAWL 319