Pairwise Alignments

Query, 348 a.a., putative glycine betaine/L-proline ABC transporter, periplasmic component from Pseudomonas putida KT2440

Subject, 320 a.a., putative glycine betaine transport system, substrate binding protein from Phaeobacter inhibens DSM 17395

 Score = 65.1 bits (157), Expect = 2e-15
 Identities = 74/341 (21%), Positives = 131/341 (38%), Gaps = 48/341 (14%)

Query: 9   LAGFALLAALVPATASFAKDKIVIGEQNWTGAIAIQYILGDIISNRLDGEVSYLAGDLPI 68
           LA    L    PA A    D + I + +W  A  +  +   ++       V+ +    P 
Sbjct: 6   LASVCALGMAAPAWAEDCGD-VTITQMDWASANVVTSVAKFLMEQGYGCSVTTVPSSTPT 64

Query: 69  LFAAAAKGDGSVDVLTDIWLPNQSAAFAKYVTGGTHSLIPNKQPYVGVQGFYIPGYIQDK 128
              + A+  G+ D+LT++W+ N + A+A  V  G    + +     G++G+++P Y+ D 
Sbjct: 65  ALTSVAE-TGTPDILTELWV-NTAPAYADLVAEGKLVELADVLSDGGIEGWWVPQYVVDA 122

Query: 129 YNVKSVYDLKKPEVAKLFAPLGGGKSQLLVG------PAGWESTYIGQIKAKDFGFDGN- 181
           +          PE A L   L   K   LVG      P GW    +     +    +G  
Sbjct: 123 H----------PEAATLEGILANPK---LVGGRFDNCPDGWGCRTVNDNMNQVIDMEGKG 169

Query: 182 ---FESVSTEASVTYAKLDAAYKAERGVIFYAYTPDWIFSAYDLRRLDEPPFDGYAQDNK 238
              F+  S E   T   + AAY  E+    + + P  +   + +  +D   +D       
Sbjct: 170 IEVFDHGSGETLAT--AIAAAYADEKPWFGFYWAPTAVLGKFPMVLVDLGKYDA------ 221

Query: 239 KGDPLYKADGCWKFISPTVDADWLNKSSITCAYPDAKVHILASSALRQRAPRIAAFLENV 298
                +  +   +  SP V             YP A V   A++  +QR P IA  + N+
Sbjct: 222 ---DTHTCNSSKECASPGVSP-----------YPSAAVKTAATADFQQREPEIAELMSNI 267

Query: 299 SIDPASLNDLILKIEREKQPADAAAKAWVAANQATVDRWLS 339
           S     +N ++  +E     A+  A  ++  N+     WL+
Sbjct: 268 SFTNDQMNGVLAWMEDNNASAEEGAVYFLTNNKDQWGGWLN 308