Pairwise Alignments

Query, 698 a.a., glycine betaine ABC transporter, ATPase/permease fusion protein from Pseudomonas putida KT2440

Subject, 312 a.a., choline uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  186 bits (473), Expect = 1e-51
 Identities = 131/320 (40%), Positives = 170/320 (53%), Gaps = 26/320 (8%)

Query: 35  LEFRAVTKRYEGSRSDSTNAVEQVNLAVRRGEVLCLMGTSGSGKSTLLRHVNRLIEPSSG 94
           +E   ++KRY       T  V  V+L V    V  ++GTSGSGK+TLLR +NRL+EP++G
Sbjct: 2   IEIEEISKRY-----GDTTVVSDVSLTVAPHTVTVVVGTSGSGKTTLLRMINRLVEPTAG 56

Query: 95  EVLIDGEVLSSLTQPTLRQLRSQRIGMVFQHFGLLPHRSVLDNVALPLELRGEPEST--R 152
            + IDGE   S+    LR+    RIG   Q  GL PHR+V  N+A    L G  ++    
Sbjct: 57  TIKIDGEDNRSIPGFELRR----RIGYAIQGHGLFPHRTVAQNIATVPTLLGWEKARIDA 112

Query: 153 RTAALRQLQAVGLKAWSERFPHELSGGMQQRVGLARALVTNPDILLMDEPFSALDPTIRR 212
           +   L +L  +    +  R+PHELSGG QQRVG+ARAL   P++LLMDEPF ALDP IR 
Sbjct: 113 KVEELLKLFQLDPSEFGPRYPHELSGGQQQRVGVARALAAEPNVLLMDEPFGALDPIIRA 172

Query: 213 DLQGRFLQLVRERGITTLLVTHDPGEALRLADRIAVLRGGRLIQVGTPGELLEHPADEGV 272
             Q     + +  G T +LVTHD  EA  LADRIAV+  G ++Q  TP E+L  PA   V
Sbjct: 173 KAQDDLAAIQKHFGTTIILVTHDMEEAFHLADRIAVMDKGEVVQYATPAEMLVRPATPFV 232

Query: 273 --AVFFDERPHIGPSIASSSDEVLSEPASAE----------LPARSTIHWIRQSVLGPAA 320
              V   ERP     I +  + V  EP SAE            A S + W  +S L P A
Sbjct: 233 ETLVGASERPFRLLDIETVGEAV--EPGSAEGRPVPEVLSQRDALSELLWTGRSAL-PVA 289

Query: 321 LAAAGRGGWFWLALLVEVAA 340
            A     G   L  +V+ AA
Sbjct: 290 AADGAILGKITLEAIVKRAA 309