Pairwise Alignments

Query, 367 a.a., Sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

Subject, 464 a.a., Flagellar regulatory protein FleQ from Pseudomonas fluorescens FW300-N2E2

 Score =  260 bits (664), Expect = 6e-74
 Identities = 129/251 (51%), Positives = 176/251 (70%)

Query: 15  SIRATAQVFEDARSQALLAHLQQVAPSEASVLIIGETGTGKELVARHIHNLSGRRNGPFV 74
           ++     V  +  S  LL    +VA S+++VLI GE+GTGKE++AR+IH  S R + PF+
Sbjct: 123 AVEGEGPVAIEPASAQLLELAARVARSDSTVLISGESGTGKEVLARYIHQQSRRASEPFI 182

Query: 75  AVNCGAFSESLVEAELFGHEKGAFTGALAAKAGWFEEGNGGTLFLDEIGDLPMAIQVKLL 134
           A+NC A  ++++EA LFGHEKG+FTGA+AA+ G FE+ +GGT+ LDEI ++PM +Q KLL
Sbjct: 183 AINCAAIPDNMLEATLFGHEKGSFTGAIAAQPGKFEQADGGTILLDEISEMPMGLQAKLL 242

Query: 135 RVLQEREVVRLGSRKSIPIDVRVVAATNVQLDKAIAAGNFREDLYYRLNVVSLQLYPLRE 194
           RVLQEREV R+G+RK I +D+RVVA TN  L   +AAG FREDLYYRL+V  L   PLRE
Sbjct: 243 RVLQEREVERVGARKPISLDIRVVATTNRDLASEVAAGRFREDLYYRLSVFPLAWRPLRE 302

Query: 195 RPGDILPLTRHFIKTYCNRLGYGEVRLSPEAERKLVSYDWPGNIRELENVIHHTLLVCRN 254
           R  DILPL    +  + N++ +   RLS EA   LV+Y WPGN+REL+N I   L++ + 
Sbjct: 303 RTADILPLAERLLNKHVNKMKHAAARLSAEARACLVAYPWPGNVRELDNAIQRALILQQG 362

Query: 255 GLVQDDDLRLS 265
           GL+Q +D  L+
Sbjct: 363 GLIQPEDFCLA 373