Pairwise Alignments

Query, 367 a.a., Sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

Subject, 470 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Pseudomonas stutzeri RCH2

 Score =  241 bits (615), Expect = 3e-68
 Identities = 119/226 (52%), Positives = 162/226 (71%)

Query: 26  ARSQALLAHLQQVAPSEASVLIIGETGTGKELVARHIHNLSGRRNGPFVAVNCGAFSESL 85
           A  Q L   +++VAP++++VLI GE+GTGKELVAR +HNLS R   P ++VNC A  E+L
Sbjct: 149 APMQDLFGKIRKVAPTDSNVLIQGESGTGKELVARALHNLSRRAKAPMISVNCAAIPETL 208

Query: 86  VEAELFGHEKGAFTGALAAKAGWFEEGNGGTLFLDEIGDLPMAIQVKLLRVLQEREVVRL 145
           +E+ELFGHEKGAFTGA A +AG  E  +GGTLFLDEIG+LP+  Q +LLRVLQE E+ R+
Sbjct: 209 IESELFGHEKGAFTGASAGRAGLVEAADGGTLFLDEIGELPLEAQARLLRVLQEGEIRRV 268

Query: 146 GSRKSIPIDVRVVAATNVQLDKAIAAGNFREDLYYRLNVVSLQLYPLRERPGDILPLTRH 205
           GS +S  +DVR++AAT+  L      G FREDLYYRL+V++L+L PLRER  D+L + + 
Sbjct: 269 GSVQSQKVDVRLIAATHRDLKTLAKTGQFREDLYYRLHVIALKLPPLRERGSDVLEIAKA 328

Query: 206 FIKTYCNRLGYGEVRLSPEAERKLVSYDWPGNIRELENVIHHTLLV 251
           F+     R+G  ++  S +AE+ +  Y WPGN+RELEN I    ++
Sbjct: 329 FLARQGERMGSDDLHFSRDAEQAIRHYSWPGNVRELENAIERAAIL 374