Pairwise Alignments

Query, 367 a.a., Sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

Subject, 446 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  242 bits (617), Expect = 2e-68
 Identities = 121/228 (53%), Positives = 157/228 (68%)

Query: 24  EDARSQALLAHLQQVAPSEASVLIIGETGTGKELVARHIHNLSGRRNGPFVAVNCGAFSE 83
           E A  Q L   + QVA ++A +L+ GETGTGKELVAR +H  S RR   FVA+NCGA  E
Sbjct: 147 ETAAIQTLRDTIAQVADTQADILLFGETGTGKELVARSLHEQSSRREQNFVAINCGAVPE 206

Query: 84  SLVEAELFGHEKGAFTGALAAKAGWFEEGNGGTLFLDEIGDLPMAIQVKLLRVLQEREVV 143
           +L+E+EL+GHEKGAFTGA + + G FE   GGTLFLDEI  +PM  Q++LLRVLQER + 
Sbjct: 207 NLIESELYGHEKGAFTGADSRRVGKFEHAQGGTLFLDEIESMPMQAQIRLLRVLQERVIE 266

Query: 144 RLGSRKSIPIDVRVVAATNVQLDKAIAAGNFREDLYYRLNVVSLQLYPLRERPGDILPLT 203
           R+GS + IP+D+RV+AAT + L +A A G FR+DLYYRLN+V+L + PLRER  DI  L 
Sbjct: 267 RIGSNELIPLDIRVIAATKIDLKQAAAEGKFRQDLYYRLNIVTLTIPPLRERREDIPALF 326

Query: 204 RHFIKTYCNRLGYGEVRLSPEAERKLVSYDWPGNIRELENVIHHTLLV 251
            HF+     R G     L+    + L+S+DWPGN+REL N     +L+
Sbjct: 327 HHFLLVAAARYGKAATALTASDVQSLLSHDWPGNVRELRNAAERYVLL 374