Pairwise Alignments

Query, 367 a.a., Sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

Subject, 474 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

 Score =  251 bits (640), Expect = 4e-71
 Identities = 128/256 (50%), Positives = 177/256 (69%), Gaps = 5/256 (1%)

Query: 25  DARSQALLAHLQQVAPSEASVLIIGETGTGKELVARHIHNLSGRRNGPFVAVNCGAFSES 84
           DA S+ L +   +VA ++A+VL+ GE+G GKE+VAR+IHN S RR GPFVA+NC A  ES
Sbjct: 134 DAASRNLFSLAARVAQTDATVLLTGESGVGKEVVARYIHNHSARRKGPFVAINCAAIPES 193

Query: 85  LVEAELFGHEKGAFTGALAAKAGWFEEGNGGTLFLDEIGDLPMAIQVKLLRVLQEREVVR 144
           L+EA LFG+EKGAFTGA  A+AG FE+   GTL LDE+ ++P+A+Q KLLRVLQEREV R
Sbjct: 194 LLEATLFGYEKGAFTGANQAQAGKFEQAQNGTLLLDEVTEMPLALQAKLLRVLQEREVER 253

Query: 145 LGSRKSIPIDVRVVAATNVQLDKAIAAGNFREDLYYRLNVVSLQLYPLRERPGDILPLTR 204
           +G ++ + +D+RVVA +N  + +A+A G FREDLYYRLNV  L +  LR+RP D++PL R
Sbjct: 254 VGGKQPVRLDIRVVATSNRDMAEAVAKGIFREDLYYRLNVFPLLIPALRQRPDDVVPLAR 313

Query: 205 HFIKTYCNRLGYGEVRLSPEAERKLVSYDWPGNIRELENVIHHTLLVCRNGLVQDDDLRL 264
           HF+     + G   + L+P AE+ L  + WPGN+REL NV+   L+     L   D +  
Sbjct: 314 HFLADQGGKSGRPGLLLTPAAEQALRVHSWPGNVRELVNVMQRALI-----LAPGDQVDA 368

Query: 265 SHLRIERQDKSPVSTA 280
           +HL +  +  +P + A
Sbjct: 369 AHLHLVARPGAPAAAA 384