Pairwise Alignments

Query, 342 a.a., putative Ribose ABC transporter, periplasmic ribose-binding protein from Pseudomonas putida KT2440

Subject, 347 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score = 48.9 bits (115), Expect = 2e-10
 Identities = 77/317 (24%), Positives = 131/317 (41%), Gaps = 29/317 (9%)

Query: 41  GAEASATVPSLKG------------KRIAISTVGTSIYFDSRAFKAQVEEVQRLGGTPIT 88
           GA ASA VPSL              K   +  + T  +F S  + A VE   +  G  + 
Sbjct: 17  GAAASA-VPSLAADMPKPFDKPGDVKIALVRYLSTGDFFQS--YLAGVEAQAKALGVELQ 73

Query: 89  LDAGRNDKAMVTQL-QNLVTLKPDAVIHTLGTLSIIEPWFKRISAAGIPLFTIEVPSQYA 147
           +   R D A+   +    + L  D +I   G    ++   +R   AGI +   +V  +  
Sbjct: 74  IFDSRQDAALQADMVDQAIALGVDGIIIQHGLTESMKEAAQRAVDAGIKVVAFDVNVENE 133

Query: 148 -VNTISADNWSTGLLLAKQLVADLRGKGRVLLFNGFYGVPSCGIRYDQLKLVSKFYPQIE 206
            +  I   +     L  +Q + +  G+     +    G+     R +  K   K Y  IE
Sbjct: 134 KIPQIEQSDRDLARLALEQAIKE-NGESFKAGYVYVAGIAPLDRRDETWKEFKKKYSGIE 192

Query: 207 FIQP--ELRDVIPNTVQD-ARSQVAALLNKYPKGELDAIWAAWDLPQLGASQALIEAG-R 262
                  + + I N+V + ARS ++A        ++  ++A +D    G   A+ EAG  
Sbjct: 193 EAAQFGTMDNPIANSVANQARSVISA------NPDITVMFAPYDEFAKGVKIAVDEAGLS 246

Query: 263 NEVRTYGVDGTPEVLELLRQPGSPVAAVVAQQPALIGRTAVHNVARYLAGEHDLPPETFV 322
           + V+ Y  D +   +  +R+ GS   A  A  PA++G+ +V ++A  LAGE+        
Sbjct: 247 SSVKIYSADISTSDIAAMREAGSAWVATAATNPAVVGQVSVRSLAMLLAGENPGRQVIVP 306

Query: 323 ETLLTTAGNVD-DVKRI 338
            TL+T     D D+K +
Sbjct: 307 PTLITQKDLSDQDIKNM 323