Pairwise Alignments

Query, 342 a.a., putative Ribose ABC transporter, periplasmic ribose-binding protein from Pseudomonas putida KT2440

Subject, 317 a.a., periplasmic binding protein/LacI transcriptional regulator from Klebsiella michiganensis M5al

 Score = 82.0 bits (201), Expect = 2e-20
 Identities = 82/314 (26%), Positives = 135/314 (42%), Gaps = 10/314 (3%)

Query: 20  AMLALGLAAPLTRAMAAGADSGAEASATVPSLKGKRIAISTVGTSIYFDSRAFKAQVEEV 79
           A LA+ +AA +T          A ++A   S K  RI +     S  F S   +   +  
Sbjct: 7   AWLAIAVAAVITTMTGLAP---AASAAPQESKKIARIGLMVQDMSNPFFSAMERNAKQAA 63

Query: 80  QRLGGTPITLDAGRNDKAMVTQLQNLVTLKPDAVIHTLGTLSIIEPWFKRISAAGIPLFT 139
            ++G T    DA  +     TQ+   +  K D +I +    S IEP  +R  AAGI +  
Sbjct: 64  AKIGATLNVQDAQVDLANQNTQIDAFIQQKVDLIIISAVDESGIEPAIQRAKAAGIIVIA 123

Query: 140 IEVPSQYAVNTISADNWSTGLLLAKQLVADLRGKGRVLLFNGFYGVPSCGIRYDQLKLVS 199
           ++ P++ A   I  +    G    + L + + GKG+VLL +G   + +   R    K V+
Sbjct: 124 VDTPAKGADAAIMTNAIQAGETSCEYLFSQMGGKGKVLLVDG-TPIQTIIDRIKGCKNVA 182

Query: 200 KFYPQIEFIQPELRDVIPNTVQDARSQVAALLNKYPKGELDAIWAAWDLPQLGASQALIE 259
           + YP I+ +    +    N           +L   P  ++  I+   D   LGA  A+ +
Sbjct: 183 QKYPDIKIVG---QQASRNDRASGLMVTTDMLTANP--DVSGIFGMNDPSALGAVLAVEQ 237

Query: 260 AGR-NEVRTYGVDGTPEVLELLRQPGSPVAAVVAQQPALIGRTAVHNVARYLAGEHDLPP 318
           AG+   +   GVDG+PE +E L++ GSP      Q P  + R A+      + G+     
Sbjct: 238 AGKAGAINVTGVDGSPEAVEELKRGGSPFIGTATQNPGEMVRQAISLAQDMVDGKPIASR 297

Query: 319 ETFVETLLTTAGNV 332
              + ++L T  NV
Sbjct: 298 TVLIPSVLVTRDNV 311