Pairwise Alignments

Query, 342 a.a., putative Ribose ABC transporter, periplasmic ribose-binding protein from Pseudomonas putida KT2440

Subject, 326 a.a., sugar ABC transporter substrate-binding protein from Klebsiella michiganensis M5al

 Score =  232 bits (592), Expect = 9e-66
 Identities = 128/281 (45%), Positives = 180/281 (64%), Gaps = 5/281 (1%)

Query: 45  SATVPSLKGKRIAISTVGTSIYFDSRAFKAQVEEVQRLGGTPITLDAGRNDKAMVTQLQN 104
           +A   SL+GK I ++ VGT  ++D  A+K   EEV++LGG  I +D GR+++        
Sbjct: 24  AAEALSLQGKTIGVAVVGTQHFWDREAYKGATEEVEKLGGKAIGVDGGRDNQVHANNHDI 83

Query: 105 LVTLKPDAVIHTLGTLSIIEPWFKRISAAGIPLFTIEVPSQYAVNTISADNWSTGLLLAK 164
           L++ K DAVI  LG  S +EP FK +  AGIP+FT++  S+Y+VN  ++DN++ G  + +
Sbjct: 84  LLSRKVDAVISILGD-SAVEPKFKALRDAGIPVFTVDHVSKYSVNNTTSDNYTLGSTIGR 142

Query: 165 QLVADLRGKGRVLLFNGFYG-VPSCGIRYDQLKLVSKFYPQIEFIQPELRDVIPNTVQDA 223
            +  +L GKG V +FN F   +  CGIRYDQ K V K YP I  IQPEL +   N+ +DA
Sbjct: 143 YMADELGGKGNVAVFNAFSSSLRICGIRYDQWKYVLKDYPDIHIIQPELAEQFANSPEDA 202

Query: 224 RSQVAALLNKYPKGELDAIW-AAWDLPQLGASQALIEAGRN-EVRTYGVDGTPEVLELLR 281
           R +   LL++YPKG+LDAI  A WD P +G  QAL E GR+ +V+   +D  PE LE++ 
Sbjct: 203 RKKTLELLSQYPKGKLDAIHVACWDQPAIGIVQALEETGRDKDVKVTAIDAGPETLEIMA 262

Query: 282 QPGSPVAAVVAQQPALIGRTAVHNVARYLAGEHDLPPETFV 322
           +PGSP  A VAQQP LIG+T+  NVARY   +  LP +TF+
Sbjct: 263 EPGSPFVANVAQQPHLIGQTSADNVARYF-DKQKLPLQTFI 302