Pairwise Alignments

Query, 354 a.a., putative Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 415 a.a., inner-membrane translocator (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  138 bits (348), Expect = 2e-37
 Identities = 96/311 (30%), Positives = 156/311 (50%), Gaps = 21/311 (6%)

Query: 30  LLLLVAFVGLPWLGNDYWLNAILIPFLVLSLAGLGLNVLTGYTGQTSVGAAGFMAVGAFA 89
           ++LL AF+ LPW+ + Y  N I+I  L+  + GLGLN++ G +GQ  +G   F AVGA++
Sbjct: 95  VVLLSAFLVLPWVVSTYQTN-IMISALLYVMLGLGLNIVVGLSGQLVLGYVAFYAVGAYS 153

Query: 90  TYGLLLRVPGLPLPLALIGGGLIAGLVGLLFGIPSSRIKGFYLMVTTLAAQFFLEWVFAK 149
            Y +L    GL     L  GG +A L G+L G P  R++G YL + TL     +  V   
Sbjct: 154 -YAILNSNFGLGFWSVLPIGGAMAALFGILLGFPVLRLRGDYLAIVTLGFGEIIRLVLEN 212

Query: 150 FPWFYNHASSGTISAPRLELFSHSLA---SPVGRYLLTLSCVVLLTWVAVNLVRSQVGRN 206
           +  F +   SG  +  R  L    L+   +    Y L L+ V++       L  S++GR 
Sbjct: 213 WSSF-SQGPSGIANIERPGLLGMQLSVSDATTYIYYLILAAVIVTILAVTRLKNSRIGRA 271

Query: 207 WMAIRDMDTAASVIGIPVERYKRLAFAVSSFYLGIAGALWAFAYLGTSSAGSFDINRSFQ 266
           W A+R+ + A   +GI +   K  AFA+ + + G AG ++A A     +  SF    S  
Sbjct: 272 WQALREDEIACQAMGIDITTTKLTAFALGACWAGFAGVIFA-AKTTFINPASFTFLESAM 330

Query: 267 ILFIIIIGGMGSIAGNFIGAAFISLTPILLSHAGQWLFGGNVDAGQLQNLQKILFGCLII 326
           +L ++++GGMGS+ G  +GA  + L P  L    ++              + ++FG  ++
Sbjct: 331 VLAMVVLGGMGSVIGVSVGALVLILLPEYLRAFSEY--------------RMLIFGATMV 376

Query: 327 WFLIKEPEGLV 337
             ++  P+GLV
Sbjct: 377 LMMVFRPQGLV 387