Pairwise Alignments

Query, 293 a.a., putative Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 291 a.a., putative high-affinity branched-chain amino acid transport system permease protein LivH from Phaeobacter inhibens DSM 17395

 Score =  159 bits (401), Expect = 9e-44
 Identities = 97/294 (32%), Positives = 159/294 (54%), Gaps = 11/294 (3%)

Query: 5   LETLIGGLLAGTLYSLVAIGFVLIYKASGVFNFAQGAMLLFAALTFVSLHEQG---LPFA 61
           ++ L+ GL  G +Y L+A+GFVLIYKA+   NFAQG  ++  A   + L       LPF 
Sbjct: 4   VQLLVSGLANGCVYGLIALGFVLIYKATEAVNFAQGDFMMLGAFVTLGLTNAEYLHLPFW 63

Query: 62  LALALTVLVMIVGALLIERLVLRPLVNRSQITLFMATLGLSFIIEGLAQGLMGAQVRALD 121
           LA  L++ +M     L++ ++LR L  ++Q  + + T+ L F+I   A  + G + + L+
Sbjct: 64  LAAPLSIAIMAGLGYLLDLVILRHLFGQNQTAVVILTIALGFVIRFFAGAIWGHEPQTLE 123

Query: 122 --LGIEDVPLFVGELMISQFDLVASGVSALLVAVLALLFNKTRIGVALRAVADDTRAALS 179
             L + DV L    +++   DL    V+ LL   L   F +T++G+A++A + +  AA  
Sbjct: 124 SPLALGDVQL--AGVVLGLADLAIIIVTVLLTWSLYQFFQRTKLGLAMQAASQNQMAAYF 181

Query: 180 LGINLNRIWQIVWAVAGMVGLVAGLLWGARQGVQFSLSLVVLKALPVLIIGGFTSIGGAI 239
           +GI + R+  ++W ++G    VAG+L+ ++  +  +  L+ +KA    +IGGF S+ GA+
Sbjct: 182 MGIPVKRVQGLIWGLSGATAAVAGILFASKGAIDPNAGLLGIKAFAAAVIGGFGSLPGAL 241

Query: 240 VGGLIVGAAENLAEAYIGPLIGGGITPWFAYFLALIFLYIRPAGLFGDRAIERV 293
            GGLIVG  E  A  Y    +  G +    Y L L  L  RP GLF     ++V
Sbjct: 242 AGGLIVGVIEPFAARY----LAAGYSQIAPYVLLLAVLVFRPHGLFSQVRTKKV 291