Pairwise Alignments

Query, 293 a.a., putative Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 301 a.a., branched-chain amino acid ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  140 bits (353), Expect = 4e-38
 Identities = 98/306 (32%), Positives = 157/306 (51%), Gaps = 18/306 (5%)

Query: 1   MNFFLETLIGGLLAGTLYSLVAIGFVLIYKASGVFNFAQGAMLLFAAL----TFVSLHEQ 56
           M  FL+ L  GL  G +Y+L+A+G+ ++Y    + NFA G +    A      F +L   
Sbjct: 1   MEEFLQQLTNGLAVGGIYALIALGYTMVYGVLKLINFAHGDLFTIGAYLGFTVFAALGLS 60

Query: 57  GLPFALALALTVLVMIVGAL-----LIERLVLRPLVNRSQITLFMATLGLSFIIEGLAQG 111
           G        L V  M++G +     L+ER+  RPL + S+++  ++ LG S   +     
Sbjct: 61  GHVSGAVAVLLVTTMVMGLVALIGYLLERVAYRPLRSSSRLSAVVSALGASIFFQNAVML 120

Query: 112 LMGA--QVRALDLGIEDVPLFVGELMISQFDLVASGVSALLVAVLALLFNKTRIGVALRA 169
           + GA  QV   D+       F G + I    ++  G S  L+ +L    ++TR G A+RA
Sbjct: 121 IYGAKFQVYPNDIRPTMAVSFFG-MDIPLVRIMMFGASVALMLLLHFFIHRTRTGTAIRA 179

Query: 170 VADDTRAALSLGINLNRIWQIVWAVAGMVGLVAGLLWGARQG-VQFSLSLVV-LKALPVL 227
           VA D  AA  +GI++NR+  +V+ +   +G  AG++ G   G + F++  V  LKA    
Sbjct: 180 VAIDQGAAKLMGIDVNRVIALVFMIGPALGGAAGVMVGLYYGQIDFTMGWVYGLKAFTAA 239

Query: 228 IIGGFTSIGGAIVGGLIVGAAENLAEAYIGPLIGGGITPWFAYFLALIFLYIRPAGLFGD 287
           I+GG  +I GA+VGGL++G  E L  AYI       I    A+ + ++ L IRP GL G+
Sbjct: 240 ILGGIGNIPGAMVGGLLLGVIEALGAAYISIAWKDAI----AFLVLILILIIRPTGLLGE 295

Query: 288 RAIERV 293
           R  +++
Sbjct: 296 RVADKI 301