Pairwise Alignments

Query, 266 a.a., putative Branched-chain amino acid ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

Subject, 265 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  230 bits (587), Expect = 2e-65
 Identities = 120/250 (48%), Positives = 168/250 (67%), Gaps = 1/250 (0%)

Query: 14  LLEVRNVSLSFKGVKAISDLSFSVRRGEICALIGPNGAGKSSLLNILNGVYRADAGQLFF 73
           +L V  +SL+F GVKA++D+SF V RG + ++IGPNGAGK+S+LN ++G YR   G + F
Sbjct: 5   ILTVDQISLAFGGVKALTDVSFEVERGAVFSIIGPNGAGKTSMLNSISGRYRPQKGTIHF 64

Query: 74  ATEPLRRPHPLQAARLGIGRTFQNNALFKKMSVLDNLLTGLSRFQRSYFLEQAL-GLPRA 132
             + +    P   A LGIGRTFQN ALF  MSVLDN++ G     ++ +L   L     A
Sbjct: 65  DNQDVTHLRPNARADLGIGRTFQNLALFGHMSVLDNIMVGRHHLMKNNWLTGPLYWASPA 124

Query: 133 RREARAFAERAEQVLAFLELQPWRDVAVGSLAYGLQKRVELGRALIAQPTLLLLDEPMAG 192
           ++E  A   + E+++ FL++   R    G+L+YGL+KRVEL RA+   P L+LLDEPMAG
Sbjct: 125 QKEELAHRRQVEEIIDFLDISHVRKSIAGTLSYGLRKRVELARAMALNPKLILLDEPMAG 184

Query: 193 MNAEEKQDMSRFIADINRDLGTTVILIEHDIQVVMGLSSHVVVLDYGRKVGDGTPAEVQA 252
           MN EEK+DM+R+I D+N + G TV++IEHD+ VVM +S  V+VLD+G+K+  G P  V A
Sbjct: 185 MNLEEKEDMARYILDLNEEFGITVVMIEHDMGVVMDISHEVMVLDFGKKLISGLPEAVMA 244

Query: 253 NPDVIAAYLG 262
           +  V  AYLG
Sbjct: 245 DEHVRQAYLG 254