Pairwise Alignments

Query, 545 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

 Score = 80.1 bits (196), Expect = 2e-19
 Identities = 60/235 (25%), Positives = 108/235 (45%), Gaps = 18/235 (7%)

Query: 235 FPYTRSWGESLNIHLMALLNYLISGILRAMPGLAVALSIFFIARGISAFSKRVLRRMARP 294
           F   R W  SL       +N+L S  ++ +  L + L I   A+G +  ++ V+R     
Sbjct: 280 FSIVRHWSNSL-------VNWLASNAVQHLFQLFIFLLILLAAKGGAKVTRTVVRSAVNS 332

Query: 295 GTLKWLTAETLQPT-MRLTSLAIWLFALVMAYPYLPGSGTDAFKGLSVLLGLMISLGATS 353
             ++   +  +Q   + ++   +W+  +++    +  +      G  +  G++I      
Sbjct: 333 KNIR--ISHLMQDFFVSMSGKVVWVIGILVGLSQIGLNLAPVLTGFGIA-GVIIGFALQD 389

Query: 354 VIGQGAAGLILTYTRTLRAGEFVRVGDHEGTVTEVGMFTTTIRTGLGEVLTLPNSMITGS 413
            +   AAG++L   R    G+FV  G  +G V+ + +  TTIRT   +++ +PNS I G 
Sbjct: 390 TLSNFAAGMMLLIYRPFDVGDFVHAGGVDGKVSHMSLVNTTIRTFDNQIIIVPNSKIWGD 449

Query: 414 VTKN--YSRIVQGPGYVVDTVVTIGYDTPWRQVEAMLLEAARRTDGVLQTPTPQV 466
           V KN  + RI +     VD V  IGY     + EA+L +  +    VL+TP P +
Sbjct: 450 VIKNVTHERIRR-----VDMVFGIGYSDDLLKAEAVLTDIVKSHPAVLKTPEPNI 499