Pairwise Alignments

Query, 545 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 274 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

 Score = 67.4 bits (163), Expect = 6e-16
 Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 15/213 (7%)

Query: 266 GLAVALSIFFIARGISAFSKRVLRRMARPGTLKWLTAETLQPTMRLTSLAIWLFALVMAY 325
           GL V  +I     G      + L  +A+  T K +    +  T+ ++ +A   +ALV  +
Sbjct: 19  GLQVVFAIIIFIIG------KYLANVAKKLTTKLMNKRKIDKTV-VSFVANMAWALVFVF 71

Query: 326 PYLPGSGTDAFKGLSVLL-----GLMISLGATSVIGQGAAGLILTYTRTLRAGEFVRVGD 380
             +   G    +  S++      GL + L     +   A+G+++   R  R G+++    
Sbjct: 72  TVIATLGQIGVQTASLVAVIGAAGLAVGLALQGSLSNFASGVLMVLFRPCRVGDYIEAAG 131

Query: 381 HEGTVTEVGMFTTTIRTGLGEVLTLPNSMITGSVTKNYSRIVQGPGYVVDTVVTIGYDTP 440
             GTV E+ +F+T +RT   +V+  PNS I      NYS +       +D V+ + YD  
Sbjct: 132 IAGTVDEITIFSTKLRTPDNKVIVAPNSSIMNGTITNYSAMETRR---IDLVIGVSYDAD 188

Query: 441 WRQVEAMLLEAARRTDGVLQTPTPQVFQTALSD 473
            +Q + +L +       +L+ P   V  T L+D
Sbjct: 189 LKQTKEVLKQVLDNNAYILKDPAYTVALTELAD 221