Pairwise Alignments

Query, 508 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 516 a.a., cryptochrome/photolyase family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  378 bits (971), Expect = e-109
 Identities = 210/513 (40%), Positives = 296/513 (57%), Gaps = 18/513 (3%)

Query: 5   LVLGDQLSFDLASLASLDPARDAVL--MAEVEGEARYVPHHPLKIVLIFSAMRHFAQALR 62
           L+LGDQL+    + +     RD VL  +AE+  E  YV HH  K    F+AM+ FA  L 
Sbjct: 8   LILGDQLNH---AHSWFSEHRDDVLYLIAELHQEQEYVRHHIQKQCAFFAAMQAFADYLS 64

Query: 63  ERGWQVHYVELDAEGNSGSIVGELHRWQQALGATHIHLTECGEWRLEQA---LRDAALPL 119
             G  V +++LDA      +   + +  Q + A         E+RL +    LR + + +
Sbjct: 65  AEGHHVWHLDLDASAQYNDLPDLIAQICQQVQADAFQYQRPDEYRLLEQMANLRLSGITI 124

Query: 120 VWFRDTRFLCSREAFGRWATERRQLRMEHFYRGMRKRTGLLMEPDGSPAGGAWNFDGDNR 179
                  FL             + + MEHFYR MRKR G LM  DG P GG WNFD DNR
Sbjct: 125 GCVDTEHFLLPFAEIPEQFPASKAVLMEHFYRRMRKRFGYLMTADGKPEGGQWNFDADNR 184

Query: 180 KPL--PRQLRGPFAAHFAQDDITAAVVALVRQRFSDHYGGV-DGFDYPVTHAEAQQLWQH 236
             L  P  L+ P    F  D+  A++ A + +      G V +   +P+  A+A  L  H
Sbjct: 185 NKLKSPDLLQLPTPLCF--DNPVASIKARIERHRIPSIGQVGESLLWPINRAQALSLLAH 242

Query: 237 FLDFGLAAFGDYQDAMAEGEPY---LFHARISAALNIGLLDVRRLCDDVDKAWR--EGRV 291
           F    L  FG +QDAM    P+   L+H+R+S ALN  LL  R + +    A+R  +G++
Sbjct: 243 FCQICLPNFGRFQDAMTAQHPHRWSLYHSRLSFALNSKLLSPREVIEATISAYRAAQGQI 302

Query: 292 PLNAAEGFIRQLIGWREYVRGIYWQRMPAYAGLNHLNNHRALPEFYWTGRTRMRCMAQAI 351
            L   EGF+RQ++GWREYVRG+YW  MP Y   NHL   R LP ++W G+T+MRC+ QAI
Sbjct: 303 SLAQVEGFVRQILGWREYVRGMYWSNMPHYQTRNHLGAQRPLPSYFWNGQTKMRCLQQAI 362

Query: 352 GQTLRLGYAHHIQRLMVTGNFALLAGIVPTAICEWYLAVYMDAFEWVELPNTLGMVMHAD 411
            Q+L  GYAHHIQRLMVTGNFALL    P  +  WYL +Y+DA EWVELPNT GM + AD
Sbjct: 363 TQSLDFGYAHHIQRLMVTGNFALLTECDPDQVDAWYLGIYIDAIEWVELPNTRGMALFAD 422

Query: 412 GGYLGSKPYCASGRYIQRMSDHCKACSYRVDQVTEEEACPFNALYWHFLIRHRPQLSANP 471
           GG + +KPY ASG YI +MSD+C +C+Y+V   + E+ACP N+LYW F+++HR +L+ NP
Sbjct: 423 GGLIATKPYSASGSYINKMSDYCASCAYQVKLKSGEKACPLNSLYWRFMLKHRDRLANNP 482

Query: 472 RLALVYRSLDGMPAGRRDAVWQRGQSLLARLDA 504
           R+ ++Y++ D M +  + A+     + L+++++
Sbjct: 483 RIGMLYKTWDKMTSDSQQAILSTADAYLSQIES 515