Pairwise Alignments

Query, 508 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 516 a.a., Uncharacterized protein related to deoxyribodipyrimidine photolyase from Phaeobacter inhibens DSM 17395

 Score =  525 bits (1352), Expect = e-153
 Identities = 266/489 (54%), Positives = 328/489 (67%), Gaps = 3/489 (0%)

Query: 2   RLGLVLGDQLSFDLASLASLDPARDAVLMAEVEGEARYVPHHPLKIVLIFSAMRHFAQAL 61
           R+ L+LGDQLS DL SL   DP +D +LMAEV  EA YVPHH  K+  + SAMRHFA  L
Sbjct: 15  RIILILGDQLSHDLPSLQVGDPQKDRLLMAEVAEEASYVPHHKKKLAFVLSAMRHFADEL 74

Query: 62  RERGWQVHYVELDAEGNSGSIVGELHRWQQALGATHIHLTECGEWRLEQALRDAALP--L 119
              GW + YV LD   NSGS+ GEL R  +    T + +TE GE+RL++AL   + P  L
Sbjct: 75  TAAGWDLKYVHLDDPDNSGSLTGELDRALEQFTVTEVLVTEPGEYRLKEALNRWSGPARL 134

Query: 120 VWFRDTRFLCSREAFGRWATERRQLRMEHFYRGMRKRTGLLMEPDGSPAGGAWNFDGDNR 179
               D+RFL S + F  WA  R+QLRME+FYR MR++TGLLM+ D SP GG WN+D +NR
Sbjct: 135 TMLDDSRFLASHDMFRSWAEGRKQLRMEYFYRDMRRKTGLLMQGD-SPEGGKWNYDTENR 193

Query: 180 KPLPRQLRGPFAAHFAQDDITAAVVALVRQRFSDHYGGVDGFDYPVTHAEAQQLWQHFLD 239
           KP    +  P       D IT  V+ LV QRF  ++G +  F + VT A A +   HF+D
Sbjct: 194 KPAQNDMFMPKPMRCDPDRITQDVLELVEQRFPGNFGRLTPFWFAVTRAAALKALDHFID 253

Query: 240 FGLAAFGDYQDAMAEGEPYLFHARISAALNIGLLDVRRLCDDVDKAWREGRVPLNAAEGF 299
             L  FGDYQDAM +GEP+L+H+ +S  +NIGLL+   +C   ++A+ EG  PLNA EGF
Sbjct: 254 VALPLFGDYQDAMLDGEPFLYHSLLSQYINIGLLNPLEVCRSAERAYYEGHAPLNAVEGF 313

Query: 300 IRQLIGWREYVRGIYWQRMPAYAGLNHLNNHRALPEFYWTGRTRMRCMAQAIGQTLRLGY 359
           IRQ+IGWREY+RGIYW +MP Y   N L   R LP+FYW+G T M CMA AI QT    Y
Sbjct: 314 IRQIIGWREYMRGIYWLKMPGYTRENALGAKRDLPDFYWSGETGMACMAAAITQTRDEAY 373

Query: 360 AHHIQRLMVTGNFALLAGIVPTAICEWYLAVYMDAFEWVELPNTLGMVMHADGGYLGSKP 419
           AHHIQRLMVTGNFA+LAGI P  + EWYLAVY DA+EWVE PN +GM   ADGG LGSKP
Sbjct: 374 AHHIQRLMVTGNFAMLAGINPHQVHEWYLAVYADAYEWVEAPNVIGMSQFADGGLLGSKP 433

Query: 420 YCASGRYIQRMSDHCKACSYRVDQVTEEEACPFNALYWHFLIRHRPQLSANPRLALVYRS 479
           Y ASG YI +MS++C  C+Y V Q T  +ACPFN LYW FLIR+R +LS NPRL   YR+
Sbjct: 434 YAASGNYINKMSNYCTTCAYDVKQKTGPKACPFNPLYWDFLIRNREKLSKNPRLMQPYRT 493

Query: 480 LDGMPAGRR 488
            D M A ++
Sbjct: 494 WDRMSAEKQ 502