Pairwise Alignments

Query, 489 a.a., putative Long-chain-fatty-acid--CoA ligase from Pseudomonas putida KT2440

Subject, 601 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

 Score = 92.4 bits (228), Expect = 4e-23
 Identities = 128/584 (21%), Positives = 209/584 (35%), Gaps = 109/584 (18%)

Query: 12  LRQHAVEHPDAVAVQ----GDAQRYTYRQLLNEVESRASCLRSQPPGT---FAVVLDNGP 64
           +RQ   +  D  A++    G  Q   + Q   +++  +  L +Q  G     A+  +N P
Sbjct: 12  IRQRIAQGGDNAALKHKQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMP 71

Query: 65  EALFWDLAALFAERASVTVPPFFSATQFQHCLQQSGVTAVVCEAQWAEQLIALGFARQAP 124
                D AAL     +V + P  +  Q  + LQ + V  V    Q A+   AL    Q P
Sbjct: 72  RWTIADFAALQIRAVTVPIYPTNTPEQAAYILQNADVKVVFVGEQ-AQFDAALSQFEQCP 130

Query: 125 -------------------AGVWQR-------------DSFVAPALPEGTAKITYTSGST 152
                              A  W               D+ +  A  +    + YTSG+T
Sbjct: 131 ELRLIVAMNANIDLKQASCAMHWDEFVAQSHHQDRAPLDALIEQANYDDLFTLIYTSGTT 190

Query: 153 GTPKGVCLSAETLLRVAHELEAASRPTAPQRYLAVLPLGVLLENLGVYAALMAG------ 206
           GTPKGV L    +       +     T     L  LPL  + E       L  G      
Sbjct: 191 GTPKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYL 250

Query: 207 --------ACVQLYPQQQLGMGGASQVDFKRLLGAIALSGAQSLILVPQLL-MGLVTAIE 257
                   A  ++ P     +    +  F  +   +  +     +L    + MG   A+ 
Sbjct: 251 QDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVVKAPLVRKVLFTWAVNMGAKMAVC 310

Query: 258 RGLMRV-------------------------GPLRLVAVGGARVSPSLLARAEAVGLPVF 292
           R   R                          G +  +  GGA++  ++     A+G+ V 
Sbjct: 311 RQQQRQPSWMLKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVK 370

Query: 293 EGYGLSECASVVALNRTGAVRPGSVGKPLPHVQVRIAEDGEVLVAGSTLL-GYLGEPPVT 351
            GYG++E  + V+        P S+G  +P  QV+I E+ E+LV G  ++ GY      T
Sbjct: 371 LGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKIGENNEILVRGPMVMRGYYKLDKET 430

Query: 352 GQ------WWATGDVGHLDEDGYLYLDGRKKHQFITSFGRNVNPEWVEAELSQSGVIAQA 405
            +      +  TGD GH+DE+G L++  R K    TS G+ + P+ +E  + +   I Q 
Sbjct: 431 TESFDEQGFLKTGDAGHIDENGNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQI 490

Query: 406 FVHGEALPRNLALLWPLDPGISD----------------------EAIEQAVQQCNARLP 443
            V  +      AL+ P    + +                      E  E+ V +    L 
Sbjct: 491 AVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQKELA 550

Query: 444 DYARVHAWRRLPVPLSTLDETLTANGRPRREAILQRYHTLLSDI 487
            + +V  +R LP   S     LT   + RR+ I  RY   + ++
Sbjct: 551 KFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEM 594