Pairwise Alignments

Query, 489 a.a., putative Long-chain-fatty-acid--CoA ligase from Pseudomonas putida KT2440

Subject, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

 Score =  119 bits (297), Expect = 4e-31
 Identities = 121/527 (22%), Positives = 220/527 (41%), Gaps = 57/527 (10%)

Query: 11  LLRQHAVEHPDAVAVQGDAQR----YTYRQLLNEVESRASCLRS---QPPGTFAVVLDNG 63
           +L + A E P+ V ++    R    +TY ++ ++     S LR+    P    A++  N 
Sbjct: 22  MLLRWAKERPNEVYLKQIINRQFVEFTYAEVADKALRLVSALRALGADPGDKVALISKNC 81

Query: 64  PEALFWDLAALFAERASVTVPPFFSATQFQHCLQQSGVTAVVCEAQ---------WAEQL 114
            E    DLA +  +  SV + P   +    +CL+ S    ++              AE+ 
Sbjct: 82  AEWFICDLAMMLGDYISVPIFPTAGSETIDYCLEHSESKILIVGKLDDNKATAHVLAERP 141

Query: 115 IALGFARQAPAGV---WQRDSFVAPALP---------EGTAKITYTSGSTGTPKGVCLSA 162
             +  +   P+     ++  + +    P         E    I YTSG++G PKG  L+ 
Sbjct: 142 NLISISLPYPSAAKCQYEFQTLIKQHQPSEERPTHFDEKLMSIVYTSGTSGQPKGAMLTY 201

Query: 163 ETLLRVAHELEAASRPTAPQRYLAVLPLGVLLENLGVYAALMAGACVQLYPQQQ------ 216
                 A +L          R  + LPL  + E + ++ + + G  +  +P+        
Sbjct: 202 GAFTWSAQQLINHIGIEENDRLFSYLPLAHITERVYIFGSSIIGGVLTAFPESLDTFIED 261

Query: 217 ---------LGMGGASQVDFKRLLGAIALSGAQSLILVPQLLMGLVTAIERGLMRVGPLR 267
                    + +     +  +R+   +       L+ +P +   +   +  GL  +   R
Sbjct: 262 VKMHRPTLFISVPRLWTLFQQRIQDKLPQKKLNILLKIPFVNSLIKRKLADGL-GLDQAR 320

Query: 268 LVAVGGARVSPSLLARAEAVGLPVFEGYGLSECASVVALNRT-GAVRPGSVGKPLPHVQV 326
           ++  G A VSP+LL    +VGL + E +G++E  +   LN    A + G+VG   P +++
Sbjct: 321 VLGCGSAPVSPALLEWYRSVGLNITEAWGMTESFAYSTLNYPFRADKIGTVGNAGPGIEL 380

Query: 327 RIAEDGEVLVAGSTLL-GYLGEPPVTGQ------WWATGDVGHLDEDGYLYLDGRKKHQF 379
           +IAED E+LV    L  GY      T +      W  TGD+G LD +GYL + GRKK  F
Sbjct: 381 KIAEDEEILVRSKGLFAGYYKNDTATAESFNDDGWLHTGDIGSLDSEGYLTIQGRKKDTF 440

Query: 380 ITSFGRNVNPEWVEAELSQSGVIAQAFVHGEALPRNLALLWP-----LDPGISDEAIEQA 434
            T+ G+ V P  +E +L +   +    + G  LP  + L  P      D    +   ++ 
Sbjct: 441 KTAKGKFVAPVPIEKKLFEYSRVEMMCLIGSGLPAPILLAVPHNFPHFDRARYERTTQKV 500

Query: 435 VQQCNARLPDYARVHAWRRLPVPLSTLDETLTANGRPRREAILQRYH 481
           + + N+ L  + ++     +  P S  +  LT   + +R  + ++YH
Sbjct: 501 IARINSELESHEQIKGVLMIKDPWSIDNGILTPTLKIKRHVLEKKYH 547