Pairwise Alignments

Query, 489 a.a., putative Long-chain-fatty-acid--CoA ligase from Pseudomonas putida KT2440

Subject, 655 a.a., AMP-dependent synthetase and ligase (NCBI) from Rhodospirillum rubrum S1H

 Score = 90.5 bits (223), Expect = 2e-22
 Identities = 105/433 (24%), Positives = 164/433 (37%), Gaps = 92/433 (21%)

Query: 126 GVWQRDSFVAPALPEGTAKITYTSGSTGTPKGVCLSAETLLRVAHELEAASRPTAPQRYL 185
           G+++R+  VA    +  A +  TSG+T  PK   L A   LR   +   A        Y+
Sbjct: 183 GLYERE--VAAGHGDDVAVLCTTSGTTARPKLAMLQAGAFLRHCLDYLEADPRHPGDDYV 240

Query: 186 AVLPLGVLLENL-GVYAALMAGACVQLYPQQQLGMGGASQVDFKRLLGAIALSGAQSLIL 244
           +VLPL  ++E +  V  AL+A   V    ++   M    ++            G + ++L
Sbjct: 241 SVLPLPWIMEQVYAVGQALIARGIVNFVEEEATTMADLREI------------GPRFVLL 288

Query: 245 VPQLLMGLVTAIERGLMRVGP--------------------------------------- 265
            P++  G+   +   +M   P                                       
Sbjct: 289 APRVWEGIAADVRARMMDASPFKRAMFEIGMGLGKRALARNRRSWLAEALLFRALRDRLG 348

Query: 266 ---LRLVAVGGARVSPSLLARAEAVGLPVFEGYGLSECASVVALNRTGAVRPGSVGKPLP 322
              L   A GGA + P   +   A+G+P+ + YG +E A    ++R G + P +VG P  
Sbjct: 349 FSFLTSAATGGAAMGPETFSFFHAMGVPLKQLYGQTELAGAYVIHRAGDIDPETVGLPFA 408

Query: 323 HVQVRIAED-----GEVLVAGSTLL-GYLGEPPVTG------QWWATGDVGHL-DEDGYL 369
              VRI        GE+L     L  GY G    T        W  TGD G L  E+G+L
Sbjct: 409 KSAVRIDNPDAEGVGEILGRDQGLFAGYFGAGDATAIDDLRDGWLHTGDAGFLKKENGHL 468

Query: 370 YLDGRKKHQFITSFGRNVNPEWVEAELSQSGVIAQAFVHGEALPRNLALL---------W 420
            +  R K   + S G   +P+++E +L  S  IA+A + G   P   A++         W
Sbjct: 469 VVIDRVKDLAVMSNGVRFSPQFIENKLKFSAFIAEAVILGRDRPYLAAIICIRWSILAKW 528

Query: 421 PLDPGISDEA-------------IEQAVQQCNARLPDYARVHAWRRLPVPLSTLDETLTA 467
                IS                +   V++ NA LP   RV  +  L   L   D  LT 
Sbjct: 529 AEQRAISFTGYSSLAARPEVYALLRAEVERVNASLPAAQRVRKFLLLYKELDPDDGELTR 588

Query: 468 NGRPRREAILQRY 480
             + RR  + ++Y
Sbjct: 589 TRKVRRGVVAEKY 601