Pairwise Alignments

Query, 489 a.a., putative Long-chain-fatty-acid--CoA ligase from Pseudomonas putida KT2440

Subject, 605 a.a., AMP-dependent synthetase and ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  141 bits (355), Expect = 7e-38
 Identities = 148/565 (26%), Positives = 243/565 (43%), Gaps = 105/565 (18%)

Query: 26  QGDAQRYTYRQLLNEVESRASCLRSQ---PPGTFAVVLDNGPEALFWDLAALFAERASVT 82
           +G    +++  + ++V + A+ +  Q   P     +  +N P+    DLA L A   ++ 
Sbjct: 39  EGGYAPWSWASVHDQVIALANAMIDQGLAPGDRVVLASENRPDWTIADLAILAA--GAIP 96

Query: 83  VPPFFSATQFQHCLQQSGVTA---VVCEAQWAEQLI-ALGFARQAPAGVWQR--DSFVAP 136
           VP + + T+  H      V A   +V     AE+ + A   A++ P  V     D+ V P
Sbjct: 97  VPAYATHTEADHLHVLDNVEAAMAIVSTPLVAERFLRAAARAKRRPLVVMMDFDDAVVVP 156

Query: 137 A----------LPEGT----------------AKITYTSGSTGTPKGVCLSAETLLRVAH 170
           A          + EG                 A I +TSG+ GTPKGV L+  ++L   H
Sbjct: 157 AGLTVLAWNAMMAEGEGRGVPAVVHRIQTDDLASIIHTSGTGGTPKGVMLAHRSILHNCH 216

Query: 171 ELEAASRPTAPQR--YLAVLPLGVLLENL-GVYAALMAGACV------------------ 209
                      +   +L+ LPL    E+  G++  +  GA V                  
Sbjct: 217 GAFKLLETIGLEEEVFLSFLPLCHSYEHTTGLFFPISLGAQVYFAEGAETLAANMVEAKP 276

Query: 210 -------QLYPQQQLGM-------GGASQVDFKRL--LGAIALSGAQSLILVPQLLMGLV 253
                  +LY   +  +       GG  +  F+    LG   +    SL +  +L    +
Sbjct: 277 TIMTAVPRLYEMMRARILRAVEKEGGLKEKMFREAVDLGRRRMDDPASLGVKDKLTDAAL 336

Query: 254 TAIERGLMRV---GPLRLVAVGGARVSPSLLARAEAVGLPVFEGYGLSECASVVALNRTG 310
             + R  ++    G L+ +  GG  ++P +     A+G+PV +GYGL+E A VV+ N   
Sbjct: 337 DKLVRHAVKARFGGRLKAMISGGGPLNPDVGYFFRALGIPVLQGYGLTETAPVVSCNMPK 396

Query: 311 AVRPGSVGKPLPHVQVRIAEDGEVLVAGSTLL-GYLGEPPVT------GQWWATGDVGHL 363
            V+  +VG  L  V +RIA DGE+LV G  ++ GY  +P  T        W  TGDVG L
Sbjct: 397 KVKMNTVGPALYGVDIRIASDGEILVKGPLVMDGYWNDPESTRAVLDPDGWLHTGDVGTL 456

Query: 364 DEDGYLYLDGRKKHQFITSFGRNVNPEWVEAELSQSGVIAQAFVHGEALPRNLALL---- 419
           DEDG++ +  RKK   + S G N++P+ VE  L     I    V G+ +P  +AL+    
Sbjct: 457 DEDGFIQITDRKKDLIVNSGGHNISPQRVEGILGLEPEIGVGVVFGDRMPHLVALIVPEK 516

Query: 420 -----WPLDPGIS------------DEAIEQAVQQCNARLPDYARVHAWRRLPVPLSTLD 462
                W  + G               +AI +AV++ NA+L    ++  +  LP P+S  +
Sbjct: 517 EFLARWSKETGKPADLALVYEDADLRQAIGKAVERANAKLGTVEKIRKFALLPEPMSVEN 576

Query: 463 ETLTANGRPRREAILQRYHTLLSDI 487
           + LT + + RR  +  RY  L++ +
Sbjct: 577 DQLTHSMKARRHVLRDRYGALIAGL 601