Pairwise Alignments

Query, 265 a.a., putative Exodeoxyribonuclease III from Pseudomonas putida KT2440

Subject, 246 a.a., Endonuclease/exonuclease/phosphatase (NCBI) from Rhodospirillum rubrum S1H

 Score = 48.9 bits (115), Expect = 1e-10
 Identities = 61/235 (25%), Positives = 99/235 (42%), Gaps = 40/235 (17%)

Query: 4   LKIATFNI-NGIRSRLPALLAWLEREQPDIACLQELKA-ADQQFPRAELEAAGYGSLHH- 60
           +++  +NI +G   R+ A+L  + R +PD+  L E +  A  Q  RA L   G    H  
Sbjct: 12  IRVVCWNILHGGGRRVDAILTRIVRHRPDVLILTEFRNDASGQRLRAGLRDIGLWYEHFV 71

Query: 61  -GQPSWNGVAILVR----GSDPLEVRRGLPGLEEDSQSRYLEAAAHGVLVACLYLPNGNP 115
               + NGV I  R       PL+     P L        LE    G+ V  +Y+P G  
Sbjct: 72  PTHKTSNGVLIAARDYVDAVQPLDTTVRKPHL-------LLEGLVAGLSVIGVYMPMG-- 122

Query: 116 LPGPKFDYKLHWFECLIQHARSLQESGHPTLLAGDFNVVPTDMDIYNPRSWLKDALLQPE 175
                 + K  ++E ++  AR  + S  PTL+ GDFN           + ++ +      
Sbjct: 123 ------EAKTPYWEAVVAAARRREAS--PTLVIGDFN---------TGKHFIDEKGTSLV 165

Query: 176 SRACYQRLLDQGWLDAIRHLYPDERVYTFWDYFRNHWARNAGLRIDHLLLNRELA 230
           S     R+ + G++D  R   P+ R +T++ +  N      G R+DH   +  LA
Sbjct: 166 SAPFMNRMEEAGFVDLWRARNPEGREFTWFSHKGN------GFRLDHAFASPSLA 214