Pairwise Alignments

Query, 265 a.a., putative Exodeoxyribonuclease III from Pseudomonas putida KT2440

Subject, 249 a.a., exodeoxyribonuclease III from Methanococcus maripaludis S2

 Score =  117 bits (292), Expect = 3e-31
 Identities = 77/256 (30%), Positives = 130/256 (50%), Gaps = 13/256 (5%)

Query: 4   LKIATFNINGIRSRLP-ALLAWLEREQPDIACLQELKAADQQFPRAELEAAGYGSL--HH 60
           +K+ ++N+NGIR+ L    + +LERE PDI C+QE K    Q    +L   GY     + 
Sbjct: 1   MKMLSWNVNGIRACLKNGFMNFLERESPDIMCIQETKVQSGQ---VQLGLDGYFQYWNYA 57

Query: 61  GQPSWNGVAILVRGSDPLEVRRGLPGLEEDSQSRYLEAAAHGVLVACLYLPNGNPLPGPK 120
            +  ++G AI  +   P  V  G+   E +++ R +        +  +Y PN       +
Sbjct: 58  ERKGYSGTAIFTK-IKPNNVILGMENSEHNNEGRVITLEFDEYYLVNVYTPNSQR-GLTR 115

Query: 121 FDYKLHWFECLIQHARSLQESGHPTLLAGDFNVVPTDMDIYNPRSWLKDALLQPESRACY 180
            +Y+  W E  + + ++L E+  P +  GD NV   ++D+ NP++ +K+A   PE R  +
Sbjct: 116 LEYRQKWDEDFLSYIKTL-ETKKPVVFCGDLNVAHKEIDLKNPKTNVKNAGFTPEERNGF 174

Query: 181 QRLLDQGWLDAIRHLYPDERVYTFWDYFRNHWARNAGLRIDHLLLNRELAPYLKRAGVDA 240
             +++ G+LD  R    +   Y++W Y  N  ARN G RID+  +++ L   LK    DA
Sbjct: 175 DNIVNSGFLDTFREFNNEPDNYSWWSYRFNARARNIGWRIDYFCISKSLRNNLK----DA 230

Query: 241 WVRNQAKASDHAPVWI 256
           ++  +   SDH PV I
Sbjct: 231 YIMPEVMGSDHCPVGI 246