Pairwise Alignments

Query, 556 a.a., putative sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  142 bits (357), Expect = 1e-37
 Identities = 129/464 (27%), Positives = 218/464 (46%), Gaps = 46/464 (9%)

Query: 100 AEELQAITAVLAREHSLHGYETRLRRKDGSHLDVLMNLLLKPGHEGLVEGFVA---DITE 156
           AE   A   VL ++ S   YE  L    G   ++L+           V G V    D+TE
Sbjct: 526 AERFAAAHQVLTQQQSSQNYEVSLVDYTGVQREMLVYEASFSDRADKVNGIVGILLDMTE 585

Query: 157 RKLAQQRLQQLNDELEQRVAARTDELLEARDAAEAANRSKDKYLAAASHDLLQPLNAARL 216
           RK           E+E       DEL +A++AA+A +++K  +LA  SH++  P+NA   
Sbjct: 586 RK-----------EME-------DELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILG 627

Query: 217 LISTLRERPLPEAEHVLVERTHQALEGAEDLLTDLLDISRLDQAAVKPDVAVYRLDELFA 276
           +       PL   +   V R +++ +    ++ D+LD S+++   +  +   + LD++  
Sbjct: 628 MAHLALNTPLDTTQRKYVTRINESAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLD 687

Query: 277 PLVSEFSPVAEAAGLKLHARIADYA----ISTDLRLLTRILRNFLSNACRYTEEGRILLG 332
            + +  S  A+  G++    I  +     I   LRL  +++ N   NA ++T +G I+L 
Sbjct: 688 NVTAVVSLKAQEKGIEFLMDIDPHIPLGLIGDPLRL-GQVMVNLCGNAVKFTSQGEIVLS 746

Query: 333 AR-----RRGGHLRLEVWDTGRGIAQDRLQDIFLEFNQLDVGRAADRKGVGLGLAIVERI 387
           AR      +   LR  V DTG GIAQD+L D+F  F+Q D        G GLGL+I +++
Sbjct: 747 ARVSQLNEQQVTLRFAVKDTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQL 806

Query: 388 AKILGYRIEVRSWLGRGSVFSIEVPLGKEVPLAVHQAVPLPSVGDPLPGRRLLVLDNEVS 447
            +++G +I V S  G+GS F   V  G +       + P+  + D    +R+LV+D+  S
Sbjct: 807 VELMGGQITVHSEEGKGSTFEFSVVCGLQDAKMRDISQPVHGLAD----KRVLVVDDNDS 862

Query: 448 ILESMGALLGQWGCEVVTATDREGALLALQGRAPELILADYHLDHGVVGCEVVRY----- 502
               + +LL      VVT ++   AL  +Q +  +++  D+++  G+ G E++       
Sbjct: 863 ARHILDSLLTAMRFNVVTVSNGFEALSEIQQKPFDMLFVDWNMP-GMNGIELLTRVKTLG 921

Query: 503 LREHFATAIPAVIITA-DRSDQCRRGLQKLGAPLLNKPVKPGKL 545
           LR H    + + ++TA  R         KL   L+ KPV P  L
Sbjct: 922 LRGH----MKSFLVTAYGREINLDGENSKLVDALIVKPVNPSNL 961