Pairwise Alignments

Query, 556 a.a., putative sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 758 a.a., histidine kinase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  232 bits (592), Expect = 3e-65
 Identities = 190/547 (34%), Positives = 276/547 (50%), Gaps = 60/547 (10%)

Query: 48  LFENAVHGIFQASLQDGMRAANPALARMLGYDDPQAVLFSLTDLAANLFDGGAEELQAIT 107
           +F+N   G+   S +  +   N     +LG   P  +L + T L+  L      +     
Sbjct: 209 VFQNMGSGVCSFSAEGEVMMQNARFREILGV--PLTLLQAGTPLSTLL------DFLRTR 260

Query: 108 AVLAREHSLH--GYETRLRRKDG-----SH-----LDVLMNLLLKPGHEGLVEGFVADIT 155
           A+++ +  LH   +   LRRK       SH     LDV  N+L   G   LVE  + D+T
Sbjct: 261 ALISEDAWLHVDAWRDELRRKGALVRRVSHGSNRVLDVHANVLPDGGF--LVE--LKDVT 316

Query: 156 ERKLAQQRLQQLNDELEQRVAARTDELLEA---------------------RDAAEAANR 194
                     Q  + LE RVAART EL  A                     ++ AEAA  
Sbjct: 317 LET-------QTTELLENRVAARTAELTRANARLTAEYEQKARVEEELRLSKERAEAAVS 369

Query: 195 SKDKYLAAASHDLLQPLNAARLLISTLRERPLPEAEHVLVERTHQALEGAEDLLTDLLDI 254
           SK ++LAAASHDLLQP+NAA+LLISTL+E     +   +V+R   A   AE+LL  LLDI
Sbjct: 370 SKTRFLAAASHDLLQPINAAKLLISTLQEATRETSFQPMVKRLKGAFSSAENLLHSLLDI 429

Query: 255 SRLDQAAVKP-DVAVYRLDELFAPLVSEFSPVAEAAGLKLHARIADYAISTDLRLLTRIL 313
           SRL+ A  +   +    L  L   +  + SP+A   G++L        + +D   L R +
Sbjct: 430 SRLESADPEAVSLMAVDLGALMESVRDDQSPLAARKGVRLTVVPCSLFVRSDPVYLMRSI 489

Query: 314 RNFLSNACRYTEE-GRILLGARRRGGHLRLEVWDTGRGIAQDRLQDIFLEFNQLDVGRAA 372
           +N + NA +YTE  GR+L+G RR+GGH+ LEVWDTG GIA+     IF EF + D  +  
Sbjct: 490 QNLVVNAVQYTEPGGRVLVGGRRKGGHVVLEVWDTGVGIAKKDQARIFEEFTRGDDVQLG 549

Query: 373 DRKGVGLGLAIVERIAKILGYRIEVRSWLGRGSVFSIEVPLGKEVPL-AVHQAVPLPSVG 431
              GVGLGL+IV+R  ++LG+ + VRS  G GSVF +++ L   VP+    Q+      G
Sbjct: 550 --SGVGLGLSIVDRACRLLGHELSVRSKPGCGSVFRMKIALVDGVPIRRKTQSAAADDGG 607

Query: 432 DPLPGRRLLVLDNEVSILESMGALLGQWGCEVVTATDREGALLAL--QGRAPELILADYH 489
            P+    ++V++N+  +L      L QWG  V+ A   E AL  +   G  P++ILADY 
Sbjct: 608 QPI-DHIVMVIENDEDVLYGTTQWLEQWGASVLAARSTEEALAHVNDMGIPPDIILADYQ 666

Query: 490 LDHGVVGCEVVRYLREHFATAIPAVIITADRSDQCRRGLQKLGAPLLNKPVKPGKLRAVL 549
           LD    G   +  +R    + +PA++ITADRSD  RR   +    ++ KP    +LR ++
Sbjct: 667 LDGPDTGISAISAIRSLTGSDVPAIMITADRSDLVRRLGIENDLTVMTKPAALSRLRPLI 726

Query: 550 SQLLLVH 556
              +  H
Sbjct: 727 DWTIQRH 733