Pairwise Alignments

Query, 308 a.a., putative Periplasmic binding protein from Pseudomonas putida KT2440

Subject, 304 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

 Score =  373 bits (957), Expect = e-108
 Identities = 185/289 (64%), Positives = 224/289 (77%), Gaps = 3/289 (1%)

Query: 23  VLLSGLLLWCAAAQAQ---VRNYDAIIAAGELKVAVYKDFAPYSFQDHGQPRGVDVELAQ 79
           VL   L L  A AQA+   VR +D II +G LKVA+Y+ F PYS+   G+PRGVDVELA+
Sbjct: 7   VLALWLTLCGALAQAEIVKVRAFDDIIESGVLKVAMYEKFPPYSYLHDGEPRGVDVELAR 66

Query: 80  ALATALGVRLQLIWAPPGEKLDDDLRDYIWRGSPLRHQQLADLMMRVPYDRAYAQRRNEL 139
            LA  LG++LQ++W  P E LDDDLR++IW+G  LR   LAD+M+RVPYDR +A +RNEL
Sbjct: 67  KLAEGLGLKLQVLWVTPDETLDDDLRNFIWKGHYLRPDVLADVMLRVPYDREFAYKRNEL 126

Query: 140 GELENAQVVMFGPYQQERWQVAYDRRRLASVASVAVFQQHPIGVEVDSVPSFYLTSVFNG 199
           GE+ N  VVMFGPYQ+ERWQ AYD RR+  V SVA+FQ HPIGVEVDSVPSFYL+SVF G
Sbjct: 127 GEVINELVVMFGPYQRERWQAAYDDRRIDEVPSVAIFQYHPIGVEVDSVPSFYLSSVFEG 186

Query: 200 MLSARTHHYPGVQQAFAAMQAGQVDAVMAMRGEVDWQLHQAADPQLALAENAYPNLGKQA 259
            L+  THHYP V QAFAAMQ G+VDA MAMRGEV+W L +A D  L LAENAYPN+GKQ 
Sbjct: 187 RLAKNTHHYPSVSQAFAAMQQGEVDATMAMRGEVEWLLAKADDEHLKLAENAYPNMGKQV 246

Query: 260 WEIGMAVHESNRQLAYAVEEAMEAMIRDGRLKAMYAAYGLRYEVPEMYQ 308
           W++GMAVHESNRQLAYA+EEA+E +I +G L  +YA +GL YE+P +YQ
Sbjct: 247 WDLGMAVHESNRQLAYALEEALEPLILEGELAKLYARHGLTYELPGLYQ 295