Pairwise Alignments

Query, 424 a.a., Sensor histidine kinase from Pseudomonas putida KT2440

Subject, 770 a.a., GAF domain-containing protein from Rhodopseudomonas palustris CGA009

 Score =  114 bits (284), Expect = 1e-29
 Identities = 88/276 (31%), Positives = 129/276 (46%), Gaps = 14/276 (5%)

Query: 159 AVRRAMGLLDELLGALHQVSGGQLTARLR--------EAGLPEARQLAKHFNRMAATLEQ 210
           A R    LLD +L  +  ++  + +A+L         E GL  ++ +AK           
Sbjct: 495 AHRLRESLLDVVLRRIDGIARERRSAQLLQEQLMRQVELGLSRSKDVAKTLQEEKRRRVL 554

Query: 211 AQADNAQLTQALLAVQEQERTQLAQTLHDDLGQYLAGMRAQLCLLRMVA-EQPEMVTQTV 269
            +AD +++ +  +  QE ER ++A+ LHD LGQ L  ++     L   A + PE+  +  
Sbjct: 555 VEADLSKVLRRTVEDQEAERLRIARELHDTLGQSLTLLQLGFDKLGQAAGDNPELQQRIA 614

Query: 270 QALELNCERLQQGFRALVHNLYPVALHYMPLAEAFGLLVSQWQASQGIECRLRVGEHLPA 329
           +   L  +  +Q  R L   + P AL  + +  A   L+  W     IE  L +      
Sbjct: 615 EMKSLTADVGRQANR-LAWEIRPTALDDLGIQTAIQNLLDSWSEKSSIEFDLHMTLGSRR 673

Query: 330 LPGPSRTHLYRLLQEALTNVARHAGASQVRVRLQRSPKGLRLFIRDNGCG----AHQPQR 385
           LP P  T LYR+LQEALTNV RHA A  V V LQ     + + + D+GCG      +P  
Sbjct: 674 LPSPVETTLYRVLQEALTNVVRHASARHVSVILQLGDDQVTMIVEDDGCGFVTAGRKPPS 733

Query: 386 PGVGLHSMAERARSLGGELRIFSRPGGGWALALNIP 421
             +GL  + ER   +GG L I S PG G AL   IP
Sbjct: 734 GRLGLLGIRERLSLVGGSLEIESAPGKGTALYARIP 769