Pairwise Alignments

Query, 329 a.a., putative Outer membrane protein from Pseudomonas putida KT2440

Subject, 392 a.a., Heme d1 biosynthesis protein NirF from Pseudomonas fluorescens FW300-N2E2

 Score = 45.1 bits (105), Expect = 3e-09
 Identities = 60/295 (20%), Positives = 116/295 (39%), Gaps = 16/295 (5%)

Query: 38  KDNSLSLIDLQTLEVTETLPVGQRPRGLLLSHDSKLLYICASDSDRVQVMDVATRKIIKE 97
           +D  LS +DL +  +   +  G    G  +S D KL+ +   +   V+V D  T + + +
Sbjct: 79  RDGGLSKVDLLSARIERRIIQGGNSIGGAISQDGKLIAVSNYEPGGVKVFDARTLEQVAD 138

Query: 98  LPSGKDP--------EQFALHPNDRWLYVSNEDDALVTV--IDTVTDKVLGQIEVGIEPE 147
           +P+   P              P  R+++   +   + T      +T ++     +G +P 
Sbjct: 139 IPATPLPGGQKRSRVVGLVDAPGQRFVFSLFDTGEIWTADFSQGLTPRIERFTAIGQQPY 198

Query: 148 GMAVSPDGKWAVNTSETTNMLHWIDTSTQTLADSTLVDQ----RPRFVEFSKDGSRLWAS 203
              ++PDG++ +      + +  +D     L    ++      + R   +       WA 
Sbjct: 199 DALITPDGRYYMAGLFGEDGMAQLDLWHPELGVKRVLGHYGRGQERLPVYKMPHLEGWAM 258

Query: 204 AEIGGTVTILDVTTRQVLKTLNFQIKGVHPDKVQPVGIKLSADGKYAFV--ALGPANHVA 261
           A+    V  +      V+   ++Q         QPV +    DG+  +V  A    + V 
Sbjct: 259 ADQQAFVPAVGHHQVLVMNAQDWQQTDAIAVAGQPVFVTARPDGRQLWVNFAYPDNDRVQ 318

Query: 262 VIDAKTFDVLDYLLVGRRVWQLAFTPDQSQLLATNGVSGDVSVIDAKQLKVLKSV 316
           VID +T  ++  L  G  V  + FT    QL  +    G+V V +  +L+ L S+
Sbjct: 319 VIDTQTHAIVADLRPGPAVLHMEFTARGDQLWLSARDGGEVQVWNPYRLERLSSL 373



 Score = 26.6 bits (57), Expect = 0.001
 Identities = 25/117 (21%), Positives = 51/117 (43%), Gaps = 7/117 (5%)

Query: 208 GTVTILDVTTRQVLKTLNFQIKGVHPDKVQPVGIKLSADGKYAFVALGPANHVAVIDAKT 267
           G++ I++  TR  L     +++G+    +    +  S D +YA+V  G    ++ +D  +
Sbjct: 38  GSLQIIESDTRTALG----RVEGL--GDLSHASVVFSRDQRYAYV-FGRDGGLSKVDLLS 90

Query: 268 FDVLDYLLVGRRVWQLAFTPDQSQLLATNGVSGDVSVIDAKQLKVLKSVKVGRYPWG 324
             +   ++ G      A + D   +  +N   G V V DA+ L+ +  +     P G
Sbjct: 91  ARIERRIIQGGNSIGGAISQDGKLIAVSNYEPGGVKVFDARTLEQVADIPATPLPGG 147