Pairwise Alignments

Query, 329 a.a., putative Outer membrane protein from Pseudomonas putida KT2440

Subject, 503 a.a., Cytochrome c, mono- and diheme variants from Pseudomonas stutzeri RCH2

 Score = 48.1 bits (113), Expect = 5e-10
 Identities = 65/307 (21%), Positives = 134/307 (43%), Gaps = 38/307 (12%)

Query: 38  KDNSLSLIDLQTLEVTETLPVGQRPRGLLLSHDSKLLYICASDSDRVQVMDVATRKIIKE 97
           +D  +S+ DL  L +   +  G   R L +S+D + + +       + ++D     +IK 
Sbjct: 192 RDGWVSVYDLHNLTMLAEVRAGLNTRNLAVSNDGRWVLVGNYLPGNLVLLDARDLSLIKH 251

Query: 98  LPS-GKD--PEQFALHPNDRWLYVSNEDDALVTVIDTVTD--KVLGQIEVGIEP------ 146
           +P+ G+D  P + +       +Y +   D+ V  +  V +  ++    E   EP      
Sbjct: 252 IPAVGQDGTPSRVSA------VYTAPPRDSFVVALKDVQEAWELSYAGEPTFEPRRIKAA 305

Query: 147 ---EGMAVSPDGKWAVNTSETTNMLHWIDTSTQTLADSTLVDQRPRF---VEFSKDGSRL 200
              +  + +PD ++ + TS   +    ID  +        +   P     + + +DG  +
Sbjct: 306 DYLDDFSFTPDYRYLLATSRKAHGGQVIDLDSGKAVTDIPLPGMPHLGSGIYWKRDGKWV 365

Query: 201 WASAEIG-GTVTILDVTTRQVLKTLNFQIKGVHPDKVQPVGIKLSADGKYAF--VALGPA 257
           +A+  +  G +++LD+ T +++K +        P +     ++  A+  YA+  V  GP 
Sbjct: 366 FATPNVSKGLISVLDLETWKLIKEI--------PTEGPGFFMRSQANSPYAWTDVFFGPN 417

Query: 258 NH-VAVIDAKTFDVLDYL--LVGRRVWQLAFTPD-QSQLLATNGVSGDVSVIDAKQLKVL 313
           N  V +ID +T +V   L  + G+    + FT D +  LL+     G + V DA  L+ +
Sbjct: 418 NDAVHLIDKQTLEVAHTLRPMPGKNAAHVEFTNDGRYALLSVWDTDGALIVYDANTLEEV 477

Query: 314 KSVKVGR 320
           K + + +
Sbjct: 478 KRIPMNK 484



 Score = 35.4 bits (80), Expect = 3e-06
 Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 20/107 (18%)

Query: 59  GQRPRGLLLSHDSKLLYICASDSDRVQVMDVATRKIIKELPSGKDPEQFALH------PN 112
           G  PR L +  ++   ++   D DR + +                   FALH      P+
Sbjct: 137 GAAPRNLFVVVEAGNHHVRVLDGDRFEEL-------------ANFQSHFALHGGPKFSPD 183

Query: 113 DRWLYVSNEDDALVTVIDTVTDKVLGQIEVGIEPEGMAVSPDGKWAV 159
            R++Y ++ D   V+V D     +L ++  G+    +AVS DG+W +
Sbjct: 184 GRFVYFASRD-GWVSVYDLHNLTMLAEVRAGLNTRNLAVSNDGRWVL 229