Pairwise Alignments

Query, 329 a.a., putative Outer membrane protein from Pseudomonas putida KT2440

Subject, 353 a.a., putative protein YncE from Enterobacter sp. TBS_079

 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 66/249 (26%), Positives = 106/249 (42%), Gaps = 43/249 (17%)

Query: 31  TAWVSNEKDNSLSLIDLQTLEVTETLPVGQR----------PRGLLLSHDSKLLYICA-S 79
           T W  N  + +++ ID +T +V   L +  R          PR L+    +  +YI    
Sbjct: 102 TLWFGNTINGAVTAIDAKTGDVKGRLVLDNRQRSETVKPLQPRQLVADDSTNTVYITGVG 161

Query: 80  DSDRVQVMDVATRKIIKELPS-GKDPEQFALHPNDRWLYVSNEDDALVTVIDTVTDKVLG 138
               + V+D AT K+ + + S GK     AL    + LY +N D  LVT IDT T K+L 
Sbjct: 162 QESAIWVVDGATLKLKETIGSTGKFSTGLALDAKAKRLYTTNADGELVT-IDTATHKILS 220

Query: 139 QIEVGIEPEGMAVSPDGK--WAVNTS-ETTNMLHWIDTSTQ------TLADSTLVDQ--- 186
           + +V           DGK  + +N S +T     ++  S Q       L D +++ +   
Sbjct: 221 RKKV---------QDDGKEHFYLNLSLDTAGQRAFLTDSKQPEVLVVNLKDGSVIKKIAV 271

Query: 187 -RPRFVEFSKDGSRLWASAEIGGTVTILDVTTRQVLKTLNFQIKGVHPDKVQPVGIKLSA 245
                V F+   +  + +    G V+++D  T  V KT +          V P  + LSA
Sbjct: 272 PESLAVLFNPARNEAYVTHREAGKVSVIDAKTYNVTKTFD--------TPVYPNSLALSA 323

Query: 246 DGKYAFVAL 254
           DGK  +V +
Sbjct: 324 DGKTLYVTV 332



 Score = 52.4 bits (124), Expect = 2e-11
 Identities = 68/287 (23%), Positives = 116/287 (40%), Gaps = 31/287 (10%)

Query: 58  VGQRPRGLLLSHDSKLLYICASDSDR------VQVMDVATRKIIKELPSGKDPEQFALHP 111
           VG+    + +S     L++  S S +      V  +D  T  + + + +   P    L  
Sbjct: 39  VGKGAYEMAVSQQENALWVATSQSRKTDKGGIVYRLDPVTLDVTQVIHNDLKPFGATLDN 98

Query: 112 NDRWLYVSNEDDALVTVIDTVTDKVLGQIEVGIEPEGMAVSPDGKWAVNTSETTNMLH-- 169
             + L+  N  +  VT ID  T  V G++ +        V P     +   ++TN ++  
Sbjct: 99  ATQTLWFGNTINGAVTAIDAKTGDVKGRLVLDNRQRSETVKPLQPRQLVADDSTNTVYIT 158

Query: 170 --------WI-DTSTQTLADSTLVDQRPRF---VEFSKDGSRLWASAEIGGTVTILDVTT 217
                   W+ D +T  L ++  +    +F   +       RL+ +   G  VTI D  T
Sbjct: 159 GVGQESAIWVVDGATLKLKET--IGSTGKFSTGLALDAKAKRLYTTNADGELVTI-DTAT 215

Query: 218 RQVLKTLNFQIKGVHPDKVQPVGIKLSAD--GKYAFVALGPANHVAVIDAKTFDVLDYLL 275
            ++L       K V  D  +   + LS D  G+ AF+       V V++ K   V+  + 
Sbjct: 216 HKILSR-----KKVQDDGKEHFYLNLSLDTAGQRAFLTDSKQPEVLVVNLKDGSVIKKIA 270

Query: 276 VGRRVWQLAFTPDQSQLLATNGVSGDVSVIDAKQLKVLKSVKVGRYP 322
           V   +  L F P +++   T+  +G VSVIDAK   V K+     YP
Sbjct: 271 VPESLAVL-FNPARNEAYVTHREAGKVSVIDAKTYNVTKTFDTPVYP 316



 Score = 28.9 bits (63), Expect = 2e-04
 Identities = 20/96 (20%), Positives = 44/96 (45%), Gaps = 1/96 (1%)

Query: 24  SSHTMAATAWVSNEKDNSLSLIDLQTLEVTETLPVGQRPRGLLLSHDSKLLYICASDSDR 83
           S  T    A++++ K   + +++L+   V + + V +    +L +      Y+   ++ +
Sbjct: 237 SLDTAGQRAFLTDSKQPEVLVVNLKDGSVIKKIAVPES-LAVLFNPARNEAYVTHREAGK 295

Query: 84  VQVMDVATRKIIKELPSGKDPEQFALHPNDRWLYVS 119
           V V+D  T  + K   +   P   AL  + + LYV+
Sbjct: 296 VSVIDAKTYNVTKTFDTPVYPNSLALSADGKTLYVT 331