Pairwise Alignments

Query, 263 a.a., ABC transporter from Pseudomonas putida KT2440

Subject, 256 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 51.6 bits (122), Expect = 2e-11
 Identities = 53/225 (23%), Positives = 99/225 (44%), Gaps = 18/225 (8%)

Query: 4   YWQCFNGIMLREWLRFVLQRTRL-LSALVRPLLWLLVFAAGFRAALGIAIIEPYDTYIPY 62
           YW  F  ++ +E  RF    TR+ +  LV P + + ++   F   +G  I +       Y
Sbjct: 5   YWTAFCSLLGKEINRF----TRIWVQTLVPPAITMTLYFIIFGNLIGSRIGQMNG--FSY 58

Query: 63  EVYIIPGLACMILLFNGMQGSLSMVYDREMG-SMRVLLTSPLPRPFLLGSKLLATSLISL 121
             YI+PGL  M ++ N      S  +  +   ++  LL +P+P   ++   ++      L
Sbjct: 59  MEYIVPGLIMMSVITNSYSNVASSFFSSKFQKNIEELLVAPVPNYVIIAGYVMGGVARGL 118

Query: 122 LQVYAFLAIAWLY-GVQPPAAGLLMALPALLLVAFMLSALGLLLSNAIRQLENFAGVMNF 180
           L      A++ L+  +Q    G+++A   L  V F L   GL+ +   +  ++ + V  F
Sbjct: 119 LVGAMVTAVSLLFVDLQVDHWGIIIATVFLTSVVFSLG--GLINAVFAKTFDDISIVPTF 176

Query: 181 VIFPLFFLSSALYPLWKMREASQWLYW--LCAVNPFTHAVELVRF 223
           V+ PL +L    Y +  + E     +W  +  +NP  + V   R+
Sbjct: 177 VLTPLTYLGGVFYSISLLPE-----FWQSVSKINPIVYMVNAFRY 216