Pairwise Alignments

Query, 263 a.a., ABC transporter from Pseudomonas putida KT2440

Subject, 271 a.a., putative ABC-2 type transport system permease protein from Synechococcus elongatus PCC 7942

 Score = 52.0 bits (123), Expect = 1e-11
 Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 19/199 (9%)

Query: 5   WQCFNGIMLREWLRFVLQRTRLLSA-LVRPLLWLLVFAAGFRAAL--GIAIIEPYDTYIP 61
           WQ    +   +WL   ++ T+++S+ LV PL++++ F  G  ++L  G  +   Y++Y+ 
Sbjct: 19  WQDSLTVFWGDWLDLRVRITQIVSSGLVSPLIYIVAFGFGLGSSLRPGSGLPSGYNSYLE 78

Query: 62  YEVYIIPGLACMILLFNGMQGSLSMVYDREMGSMRVLLTSPLP-RPFLLG-SKLLATSLI 119
           +   I+PG+  +  +     G+   +    + S     T  LP  P  L   K++A  + 
Sbjct: 79  F---ILPGMVALSSMAISFGGTTFSICGERLFSKTFEETLLLPVHPLALHIGKMIAGVVR 135

Query: 120 SLLQVYAFLAIAWLYGVQPPAAGLLMALPALLLVAFMLSA-----LGLLLSNAIRQLENF 174
            LL   + LAIA L      A G    L  L L+  +L+      +G+L+   ++ LE  
Sbjct: 136 GLLTSVSLLAIAIL------ATGSWGFLNPLFLLTLVLNCATFAGIGVLVGLRVKSLETV 189

Query: 175 AGVMNFVIFPLFFLSSALY 193
               NF+I P+ FL +  +
Sbjct: 190 GLYNNFLIVPMSFLGATFF 208