Pairwise Alignments

Query, 632 a.a., putative hybrid sensor and regulator, histidine kinase from Pseudomonas putida KT2440

Subject, 1155 a.a., Na+/proline symporter from Pseudomonas stutzeri RCH2

 Score =  305 bits (781), Expect = 7e-87
 Identities = 181/433 (41%), Positives = 251/433 (57%), Gaps = 18/433 (4%)

Query: 197  GIFVLIRDITERRNTAQALHQAYQHLEQRVRERTAELTSLNDQLLREIEERSQAESRLRE 256
            G  +   DIT  R   +AL  A + LEQRV ERT EL+ LN  L+              E
Sbjct: 736  GFVMSFSDITAYREAERALKDANEGLEQRVSERTQELSQLNQALI--------------E 781

Query: 257  AKREAEQANLSKTKFLAAVSHDLLQPLNAARLFTSALLERDE--PQNAAHLVRNVSNSLE 314
            AK  AE AN SKT+FLAAVSHDL+QPLNAARLF++AL  +    P+ A  LV+++ +SL 
Sbjct: 782  AKSTAEAANQSKTRFLAAVSHDLMQPLNAARLFSAALSHQQSALPREAQELVQHLDSSLR 841

Query: 315  DVENLLGTLVDISKLDAGVIKADVAPFALHELMDNLAAEYVQVARSEGLELHFVGCSAVV 374
              E+L+  L+DIS+L++G +  D  PF L  L D L  E+  +AR +G+     G    V
Sbjct: 842  SAEDLITDLLDISRLESGRVTPDRNPFPLATLFDTLGTEFTVLAREQGVNFRVHGSKLRV 901

Query: 375  RSDIQLLARILRNLLSNAIRYTPSGRVVLGCRRLRGGVRIEVWDSGIGIAEEHLQDMFLE 434
             SDI+LL R+L+N L+NA RY   GRVVLG RR    +R+EVWD G GI ++ L+ +F E
Sbjct: 902  DSDIRLLRRVLQNFLTNAFRYA-KGRVVLGVRRQGASLRLEVWDRGPGIPQDKLKVIFEE 960

Query: 435  FKRGDVQRPDQDRGLGLGLAIVEKIAGILGHRIRVRSWLGKGSVFAVEVPLSTTAPKAQP 494
            FKR D  +   ++GLGLGLAI + +  +L H + VRSW GKGSVF+V VP++    + +P
Sbjct: 961  FKRLDSHQTRAEKGLGLGLAIADGLCHVLEHPLEVRSWPGKGSVFSVTVPIARALSQPRP 1020

Query: 495  SQVICEPMLERLRGARVWVLDNDAAICAGMRTLLEGWGCRVVTALSEEDLARQVDNYHAD 554
                 EP    L G +V  +DN+ +I  GM +LL  WGC+V TA S  D    +      
Sbjct: 1021 VVKRGEPQHSALTGTQVLCIDNEDSILVGMSSLLTRWGCQVWTA-SNRDECEALLAEDIR 1079

Query: 555  ADLLIADYHLDNDCNGVDAVARINARRAQPLPALMITVNYSNDLKQQIRELGHTLMHKPV 614
              L++ DYHLD    G + +A +  R  +P+P ++I+ +   +L   I   G   + KPV
Sbjct: 1080 PQLVLVDYHLDEGQTGTELMAWLRTRLGEPVPGVVISADGRPELIAAIHASGLDFLAKPV 1139

Query: 615  RPMKLKTAMSHLL 627
            +P  L+  MS  L
Sbjct: 1140 KPAALRALMSRHL 1152



 Score = 28.9 bits (63), Expect = 0.001
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 7/57 (12%)

Query: 57  LAEQVRERTDALNQAMAELKAVNRLLSEARQRAETAHQHQIRLITDNVPALIAYLNA 113
           L ++V ERT  L+Q       +N+ L EA+  AE A+Q + R +      L+  LNA
Sbjct: 761 LEQRVSERTQELSQ-------LNQALIEAKSTAEAANQSKTRFLAAVSHDLMQPLNA 810