Pairwise Alignments

Query, 632 a.a., putative hybrid sensor and regulator, histidine kinase from Pseudomonas putida KT2440

Subject, 747 a.a., sensor histidine kinase from Sinorhizobium meliloti 1021

 Score =  283 bits (725), Expect = 1e-80
 Identities = 180/479 (37%), Positives = 262/479 (54%), Gaps = 26/479 (5%)

Query: 146 EQHYQRLEGYVARALAGESVTFEFAETNINGQERYMLRS--YVPNRLASGEVVGIFVLIR 203
           E    R+ G+      GE+V           QER+  R    +  R+ S    G  V I 
Sbjct: 279 EGRRSRVAGWFKAVRRGEAV-----------QERFRRRDGMSLDIRIHSLPDDGFIVSIM 327

Query: 204 DITERRNTAQALHQAYQHLEQRVRERTAELTSLNDQLLREIEERSQAESRLREAKREAEQ 263
           D+T       A  QA   LEQRV+ERTAELT  N  L    +E+++ E+ LR AK  AE 
Sbjct: 328 DVT-------AETQASALLEQRVQERTAELTEANRLLQIHADEQTKIEAALRHAKEAAEA 380

Query: 264 ANLSKTKFLAAVSHDLLQPLNAARLFTSALLERDEPQNAAHLVRNVSNSLEDVENLLGTL 323
           A+ SKT+FLAA SHDLLQP+NAA+L+ S L ++        +VR +  S   +E+LL  L
Sbjct: 381 AHTSKTRFLAAASHDLLQPINAAKLYLSMLTDKVGQPGTEEVVRRLKRSFTSIESLLQAL 440

Query: 324 VDISKLDAGVIKADVAPFALHELMDNLAAEYVQVARSEGLELHFVGCSAVVRSDIQLLAR 383
           +DIS+LD+   + +V  F L  L+  +A +   +A   G++L  V  S  V SD + L R
Sbjct: 441 LDISRLDSSGAEFNVTSFNLGNLLQGVAEDLAPLATERGIDLRIVPSSRWVSSDQRYLMR 500

Query: 384 ILRNLLSNAIRYTPSGRVVLGCRRLRGGVRIEVWDSGIGIAEEHLQDMFLEFKR--GDVQ 441
            ++NL+ NAI+YT  GRV++GCR     VRIEVWD+G+GI+EE    +F EF R  G  +
Sbjct: 501 CVQNLVVNAIQYTERGRVLVGCRLTGDAVRIEVWDTGVGISEEDRTRIFKEFTRASGAAK 560

Query: 442 RPDQDRGLGLGLAIVEKIAGILGHRIRVRSWLGKGSVFAVEVPLSTTAPKAQPSQVICEP 501
            P    G+GLGL+IVE+    L H IR+ S  G+GSVF++EVPL+     +       EP
Sbjct: 561 GP----GMGLGLSIVERACRHLDHPIRLASQPGRGSVFSIEVPLAAPGHASVSEDPRMEP 616

Query: 502 MLERLRGARVWVLDNDAAICAGMRTLLEGWGCRVVTALSEEDLARQVDNYHADADLLIAD 561
           ML+      V +++NDA     M  +LE WG  V+ A S  D A  +       D+L+ D
Sbjct: 617 MLDGSLDLIVMIVENDADELHAMTQVLESWGASVLAADSTADAAALMQEIGTAPDILLVD 676

Query: 562 YHLDNDCNGVDAVARINARRAQPLPALMITVNYSNDLKQQIRELGHTLMHKPVRPMKLK 620
           Y LD++ NG++ +  + A     +PA++I+ N      Q   E+   ++ KPV+ ++L+
Sbjct: 677 YQLDDEDNGIETIHTLRALAGAEIPAIIISANRQRQFLQLCNEMSFAVLTKPVQLVRLR 735



 Score = 39.3 bits (90), Expect = 6e-07
 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 25  KLQRINDALIERIESGVTRGNDPYAAFQHSVVLAEQVRERTDALNQAMAELKAVNRLLSE 84
           K  RI +AL+ R E G   G   Y+ F+ ++ L  +V E+T  L +A+         L  
Sbjct: 14  KQARIIEALVNRAERGHEVGGSAYSLFESAIALQAEVWEKTKDLEKAL-------DTLDR 66

Query: 85  ARQRAETAHQHQIRLITDNVPALIA 109
           A    E A+Q Q R+  +   A++A
Sbjct: 67  ASSELEVAYQAQERIQRNLADAMVA 91



 Score = 31.2 bits (69), Expect = 2e-04
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 7/79 (8%)

Query: 46  DPYAAFQHSVVLAEQVRERTDALNQAMAELKA-------VNRLLSEARQRAETAHQHQIR 98
           D  A  Q S +L ++V+ERT  L +A   L+        +   L  A++ AE AH  + R
Sbjct: 328 DVTAETQASALLEQRVQERTAELTEANRLLQIHADEQTKIEAALRHAKEAAEAAHTSKTR 387

Query: 99  LITDNVPALIAYLNADLVY 117
            +      L+  +NA  +Y
Sbjct: 388 FLAAASHDLLQPINAAKLY 406