Pairwise Alignments

Query, 632 a.a., putative hybrid sensor and regulator, histidine kinase from Pseudomonas putida KT2440

Subject, 1306 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  139 bits (349), Expect = 1e-36
 Identities = 142/579 (24%), Positives = 253/579 (43%), Gaps = 74/579 (12%)

Query: 59  EQVRERT-DALNQAMAELKAVNRLLSEARQRAETAHQHQIRLITDNVPALIAYLNADLVY 117
           E +RE   DA  +    ++   R L++AR+ + +     ++ I D++P  + + +A+  +
Sbjct: 406 EHMRETLQDATLRLEERVEQRTRELADAREES-SRQLVLLQAIMDSMPNPVFFKDAEGRF 464

Query: 118 EFTNKVYEEWYCWPHGVMLGQSLREAH--SEQHYQRLEGYVARALAGESVTFE------F 169
              N+ YE+ +    G ++G+++RE    SE+  Q L+  V+ A+  + +         F
Sbjct: 465 LGCNRAYEDTFGVGRGQIVGKTVRELPFLSEEEKQELQA-VSEAIIRDGIMMHRELQLPF 523

Query: 170 AETNINGQERYMLRSYVPNRLASGEVVGIFVLIRDITERRNTAQALHQAYQHLEQRVRER 229
           A+  +     Y    +       G +VG+ V                             
Sbjct: 524 AD-GLRHDTLYWANGFSREDGTPGGMVGVVV----------------------------- 553

Query: 230 TAELTSLNDQLLREIEERSQAESRLREAKREAEQANLSKTKFLAAVSHDLLQPLNAARLF 289
                        +I ER   E  LR A+  AE+A  +K+ FLA +SH++  P+NA    
Sbjct: 554 -------------DISERKLMEEELRRARATAEEATEAKSLFLANMSHEIRTPMNAIIGM 600

Query: 290 TSALLERDEPQNAAHLVRNVSNSLEDVENLLGTLVDISKLDAGVIKADVAPFALHELMDN 349
               ++ +        V  + N+   +  ++  ++D SK++AG +  +  PF+L +++DN
Sbjct: 601 AHLAMKTELTPKQRDYVGKIHNAAISLLGIINDILDFSKIEAGKLSLEYVPFSLEDVLDN 660

Query: 350 LAAEYVQVARSEGLELHF---VGCSAVVRSDIQLLARILRNLLSNAIRYTPSGRVVLGCR 406
           ++      A  +GLEL F    G  A +  D   L +IL NL+SNAI++T  G++ L  R
Sbjct: 661 VSGLLGLKANEKGLELLFNVNAGTPAGLVGDPLRLNQILTNLVSNAIKFTERGQITLTTR 720

Query: 407 RLRGG---VRIEVW--DSGIGIAEEHLQDMFLEFKRGDVQRPDQDRGLGLGLAIVEKIAG 461
            +      V+++ W  D GIG++ E L  +F  F + D     +  G GLGL+I  ++  
Sbjct: 721 PVDQAGDRVKLQFWIEDMGIGMSREQLLHLFQAFTQADGSTTRKYGGTGLGLSISRRLVE 780

Query: 462 ILGHRIRVRSWLGKGSVFAVEVPLSTTAPKAQPSQVICEPMLERLRGARVWVLDNDAAIC 521
           ++G  I   S LG+GS F            A+P       +   L G RV V D++ A  
Sbjct: 781 MMGGTIWADSTLGEGSTFCFTAWFGRAEELARP-----RTLPASLAGLRVLVADDNGAAR 835

Query: 522 AGMRTLLEGWGCRVVTALSEEDLARQVDNYHADAD---LLIADYHLDNDCNGVDAVARIN 578
             +   L     R     S  +   Q+      AD   +L  D+ +  D +GV  + ++ 
Sbjct: 836 EILGEALRHLDLRPDLVASGAEALAQLTEMQGGADPYRVLFLDWQMP-DLDGVSTLHKLQ 894

Query: 579 AR--RAQPLPALMITVNYSNDLKQQIRELGHT-LMHKPV 614
               +AQ    +M+T     +L++Q   LG   ++ KPV
Sbjct: 895 QALPQAQWPRVVMVTAYDQEELRRQTENLGICGILVKPV 933