Pairwise Alignments

Query, 562 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 517 a.a., flavocytochrome c flavin subunit, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 57.4 bits (137), Expect = 1e-12
 Identities = 89/374 (23%), Positives = 145/374 (38%), Gaps = 55/374 (14%)

Query: 207 NGNALVARLLRSALDRGVTLLTEKA--------ASRLLLCEERVNGALFADGQA-----I 253
           +G  ++  L+++A D+GV +  +          A R++  E R  G  F + +      I
Sbjct: 173 SGAGIIRPLIKAARDKGVIMKNQTKLEGFVKDDAGRVIGVEVR-EGFYFPNERTGKIRRI 231

Query: 254 YARRGVVLACGGFPHD-RQRISQLMPHAPDGDQ-HYSAAPRENSGDGLRLGEQAGGRVSA 311
            AR GV++A GGF  D   R+ QL     D D  +++ A  E     + +G      +  
Sbjct: 232 GARHGVIMATGGFGRDIEYRMMQLPELNSDLDSTNHAGATSEALKQMMLIG---ANPIHL 288

Query: 312 AGAHGGAWAPVSQ----VPRRNGHFGHFPHLIDRAKPGFIAVRRDGRRFVNEADCYHDFM 367
                G WA   +       +      +PH       G +   R G RF NE        
Sbjct: 289 DQIQLGPWASPDEKGFGTASQFNTIATYPH-------GIVVDVRTGERFFNELADRKARA 341

Query: 368 NALFAATPQAEQPEAWLICDHAAQRRYGIGWAKPFPFPTRFYQRSGYLHSGATLAQLAQR 427
           +A+     +  QP   +   +AA    G   A+   +  ++      +    TL +LA+ 
Sbjct: 342 DAIMTRRDEKGQPVYPIGFTNAA----GASKAQTLDWGLKY----KVISKAETLDELAKI 393

Query: 428 CGIDAEQLQRTVEGFNHHAAQGEDPTFLRGASAYNRAQGDPQQVPNPSLRPLLKGPFHAV 487
            G+ A+ L+  VE +N     G D  F R               P      L KGP++AV
Sbjct: 394 YGMPAKALKAQVERWNEAVKTGVDKEFER---------------PMQEAIVLDKGPWYAV 438

Query: 488 KLLPGSLGTFAGLDTDASARVLD-HAGQPIPGLFAVGNDMHSVMGGYYPSGGITLGPGMT 546
           ++ P       G+  +  + VL   + + IPGL+A G     + G     G   +  G+ 
Sbjct: 439 RMWPKVHYCMGGVKVNTQSEVLHLVSNKAIPGLYAAGEATGGIHGA-SRLGACAVAEGVV 497

Query: 547 FGYLAGRALSAGCA 560
            G  AGR  +A  A
Sbjct: 498 TGRNAGRNCAAASA 511



 Score = 50.1 bits (118), Expect = 2e-10
 Identities = 26/64 (40%), Positives = 40/64 (62%)

Query: 7   DVLVIGSGASGLAAAVTAAHHGLTVVVAEKASQLGGTSAWSGGWLWIPRNPLAIAEGIVE 66
           DVLV+GSG +G++AA+ A   G+ V+V +K    GG S  +GG + +  +PL    GI +
Sbjct: 49  DVLVVGSGFAGMSAALQARESGVKVMVIDKMPVFGGNSTINGGAMAVAGSPLQKQAGIED 108

Query: 67  ADDA 70
           + DA
Sbjct: 109 SVDA 112