Pairwise Alignments

Query, 562 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 589 a.a., fumarate reductase flavoprotein subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 84.3 bits (207), Expect = 1e-20
 Identities = 125/568 (22%), Positives = 204/568 (35%), Gaps = 140/568 (24%)

Query: 3   PLEC-DVLVIGSGASGLAAAVTAAHHGLT-VVVAEKASQLGGTSAWSGGWLWIPRNPLAI 60
           PLE   V+VIG+GA+G AAA++A  HG+  VV+ EK   +GG S  + G +       + 
Sbjct: 144 PLEQHQVIVIGAGAAGHAAAISARQHGVADVVILEKQPYIGGNSMLAAGGM-------SA 196

Query: 61  AEGIVEADDAPERYLRAQTHTRELDPRQRAFLRHGPEMVAFFEQHTAVQFQCGSRMPDMR 120
           AE + +A                        L+H P+  A + + T              
Sbjct: 197 AETVTQA------------------------LKHYPDSKALWYEDTM------------- 219

Query: 121 EGDGSARGGRSLCALPYDGRRLGPWLHKLRPPLDIVSLAGMGIAGGADMAAFFNA--TRS 178
                 +GG                 H +  P D+V +     + G D      A  T +
Sbjct: 220 ------KGG-----------------HNINNP-DLVKILTENGSAGVDWLQAMGADLTSA 255

Query: 179 PKAALHVGKRLLRHGRDLLLHRRGLHLVNGNALVARLLRSALDRGVTLLTEKAASRLLLC 238
             A  H  +RL         HR      +G  +V  L  +A   GV   T     +L+  
Sbjct: 256 SSAGGHNAERL---------HRPTGGAKSGPEIVNTLKETAQKLGVETRTNSKVIQLVQN 306

Query: 239 EERVNGALFADGQA----IYARRGVVLACGGFPHDRQRISQLMPHAPDGDQHYSAAPREN 294
           ++ V   +   G+     I   + V++A GGF  + + +++  P     D   +     N
Sbjct: 307 KQGVITGVLVQGKHSKLHILGAKAVIIASGGFARNNELVAKYRPDLKGVDATNNPG---N 363

Query: 295 SGDGLRLGEQAGG------RVSAAGAHGGAWAPVSQVPRRNGHFGHFPHLIDRAKPGFIA 348
            GD L    + G        + A          +S   R                 G I 
Sbjct: 364 VGDALTFAPKVGADIVDVKEIQAFPTAAAGKMVISGTARG---------------AGAIM 408

Query: 349 VRRDGRRFVNEADCYHDFMNALFAATPQAEQPEAWLICDHAAQRRYGIGWAKPFPFPTRF 408
           +  DG RF +E          ++A   +    +AWL+ D     R G           R 
Sbjct: 409 LNNDGERFCDEMGPRDKVSECIWAQKGK----DAWLVFDETVLDRLG---------QLRG 455

Query: 409 YQRSGYLHSGATLAQLAQRCGIDAEQLQRTVEGFNHHAAQGEDPTFLRGASAYNRAQGDP 468
               G +  G +  ++A+   ++A++  + ++ +N    +G+D  F R   A +      
Sbjct: 456 MLDLGIIFKGNSADEMAKATKMNAQKFDQAIKRYNDFKVKGKDADFARKNMADD------ 509

Query: 469 QQVPNPSLRPLLKGPFHAVKLLPGSLGTFAGLDTDASARVLDHAGQPIPGLFAVGNDMHS 528
                      L+ P +AVK+ P    T  GL  +    V+D  G PI GLFA G     
Sbjct: 510 -----------LQYPIYAVKIKPAVHHTMGGLKINTKTEVIDQNGLPIKGLFAAGEVTGG 558

Query: 529 VMGGYYPSGGITLGPGMTFGYLAGRALS 556
           V G    +G   +   + FG +AG  ++
Sbjct: 559 VHGANRLAGN-AIADTIVFGRIAGEQVA 585