Pairwise Alignments

Query, 570 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 582 a.a., fumarate reductase, flavoprotein subunit precursor (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 79.3 bits (194), Expect = 4e-19
 Identities = 83/359 (23%), Positives = 144/359 (40%), Gaps = 45/359 (12%)

Query: 213 GVALVARLAKSAQDLGVHLQASAPAKRLLIEG-GQVRGAWVATPQGEQLIRAK-AVVLAA 270
           G  ++++ +  A ++G+ +  +  A++L+ +  G++ G   A         AK  VV+A 
Sbjct: 261 GAEVISKFSIKADEVGLPIHTNTKAEKLIQDQTGRIVGVEAAHNGKTITYHAKRGVVIAT 320

Query: 271 GGFPNDNARRQQLFPR-----DASGHDNLALPPKGCSGDGLRLGESAGGVVATDLKSPVA 325
           GGF ++   R++  P       ++GH        G +GDG+ + E               
Sbjct: 321 GGFSSNMEMRKKYNPELDERYGSTGH-------AGGTGDGIVMAEKIHAAAKN------- 366

Query: 326 WAPVSQVPYRDGSVGHFPHIIERGKPGVIGVLANGKRFVNEAHGYYDYVSAMVAAVPQGQ 385
              +   P    + G    I +    G + +   G+RFV E     D +S  + A P   
Sbjct: 367 MGYIQSYPICSPTSGAIALIADSRFFGAVLINQKGERFVEELERR-DVISHAILAQPGRY 425

Query: 386 EVCSWLVCDHRFLRRYGLGHARPAPLPVGPHVRNGYLKRGATLEQLAQACGIDPSGLRAT 445
               W            +         +    ++G + +  TLE+ A+   I    L +T
Sbjct: 426 TYVLWNQDIENVAHTVEMHQGE-----LKEFTKDGLMYKVDTLEEAAKVFNIPEDKLLST 480

Query: 446 VTDFNTHARNGQDPAFGRGSTPFNRKQGDPQHKGPNPCVAPIEHGPFYAVKVKPGCFGTF 505
           + D N +A  G+D AF       N + G          +  +  GP++ +K  P    T 
Sbjct: 481 IKDVNHYAATGKDEAF-------NHRSG----------LVDLSKGPYWILKATPSVHHTM 523

Query: 506 AGLRTDGNARVLDEAGQPIAGLYAAGTDMASVFGGWYPSGGINLGPALTFGYVAGRHIA 564
            GL  D   RVLDE G+ I GL+AAG ++  +  G    GG      + +G +AG+  A
Sbjct: 524 GGLVVDTRTRVLDEQGKVIPGLFAAG-EVTGLTHGTNRLGGNAYTDIIVYGRIAGQEAA 581



 Score = 45.1 bits (105), Expect = 8e-09
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 5/61 (8%)

Query: 5   PLETECDVLVIGSGAAGLAAAVTAAWHGQKVIVAEKEPVFGGATAWSG-----GWAWVPR 59
           P E   DV++IGSG AG +A + A   G+  ++ EK P+ GG +  SG       +WV +
Sbjct: 128 PAEYTYDVVIIGSGGAGFSAGLEAIAAGRSAVIIEKMPIIGGNSLISGAEMNVAGSWVQK 187

Query: 60  N 60
           N
Sbjct: 188 N 188