Pairwise Alignments

Query, 585 a.a., putative ABC transporter, permease/ATP-binding protein from Pseudomonas putida KT2440

Subject, 721 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score =  194 bits (493), Expect = 1e-53
 Identities = 133/361 (36%), Positives = 191/361 (52%), Gaps = 20/361 (5%)

Query: 216 RLLAQSLERQRSSGMGLIIRASLSALLNSWAVQATFAALLVAAGLWFGDQAGGQAQDAVA 275
           R+L+Q L R   +    +I     AL     VQ   AALL    LW+G  A  + +    
Sbjct: 371 RILSQQLNRSFDAQKSGLIAGQAIAL-----VQKLTAALL----LWWGVSAVLKGEITPG 421

Query: 276 VIVALVLVCRFIDPLQDVASHVEILRGAHGQLQEIERILAAKPLPEPASPHRP------- 328
            +VA  ++   +   Q V    +I +     L  + R+     L EP    +        
Sbjct: 422 QLVAFNMLAGHVT--QPVLRLAQIWQDFQHTLIALRRV--GDILDEPRENSKQGLASVPE 477

Query: 329 VGGAINLQGVSLRYNPTGPDVLQNVNLHIPAGSMTAVIGASGSGKTSLMRLIARFFDTTE 388
           + G I    +  RY+   P+VL N++L I  G    V G SGSGK++L RL+ R +    
Sbjct: 478 LDGGIEFSNIRFRYHQDAPEVLANLSLKIKPGQFIGVTGPSGSGKSTLTRLLQRLYVPQH 537

Query: 389 GSVRIGGVDVRQMARASLTDTVSQVLQDTWLFQGSIADNIRIGKPDASDAEVLQAAHMAG 448
           G V + G+D+      SL   +S VLQ++ LF GS+ADNIR+ KP ASD E+  AA +AG
Sbjct: 538 GQVLVDGMDLAIADPVSLRRNMSVVLQESILFSGSVADNIRLCKPQASDEEIRHAAQLAG 597

Query: 449 LGHTLERLRGGLDTSVGEGGAQLSGGERQRVTIARALIRQAPVLLVDEATAALDAENQAV 508
               +E L  G +  VGE GA LSGG+RQR+ +ARAL+    +LL+DEAT+ALD  ++A 
Sbjct: 598 ALAFIEGLPHGFNQPVGEKGAALSGGQRQRIALARALLVNPRILLLDEATSALDYNSEAS 657

Query: 509 IAQTLHSLHGRCTLVVIAHQLSTVAMADHIVVLDAGQVVEQGTPATLRANGGHYARMLEQ 568
           I   +  +    T++ IAH+L+T+  AD+I VLD GQV E GT   L A  G YA++  Q
Sbjct: 658 IMSNMDEICRGRTVISIAHRLNTIRHADNIFVLDKGQVAESGTHEELLAQQGLYAKLWTQ 717

Query: 569 R 569
           +
Sbjct: 718 Q 718