Pairwise Alignments

Query, 585 a.a., putative ABC transporter, permease/ATP-binding protein from Pseudomonas putida KT2440

Subject, 617 a.a., ABC transporter, transmembrane region (NCBI) from Rhodospirillum rubrum S1H

 Score =  204 bits (518), Expect = 1e-56
 Identities = 156/485 (32%), Positives = 246/485 (50%), Gaps = 21/485 (4%)

Query: 99  LPLGWFTPDNTARLGHVITQGTMAVAQLPAHVLTPLISSSVTPLVLLVALFILHP---PL 155
           L L +     T  L  VI +GT A+  +    +     S +  +++   L+ L+     +
Sbjct: 128 LSLRFHLDRQTGGLSRVIERGTRAIEVVLRQFVLRAGPSLIELVMVCGVLWTLYDWTYAV 187

Query: 156 GLVALLALPALAAVLLFSARLGRRADHAFHQHFAAASQRMVEFAQAQSVLRAFNGEGGGT 215
            +V  LA+     + +   RL  R   + + H A AS + ++       ++ F  E    
Sbjct: 188 VMVGALAVYVAWTLAITEWRLDFR--RSMNTHDAEASSKAIDSLINYETVKYFGNEEHEA 245

Query: 216 RLLAQSLERQRSSGMGLIIRASLSALLNSWAVQATFAALLVAAGLWFGDQAGGQAQDAVA 275
           +   ++L       +      SL  +  S  +  +  A+++ A +   D  GG+      
Sbjct: 246 KRFDRALSAYEEVAVKSHRSLSLLNVGQSAIISLSLVAVMIMAAV---DIRGGRMTPGDF 302

Query: 276 VIVALVLVCRFIDPLQDVASHVEILRGAHGQLQEIERI--LAAKPLPEPASPHRPV---- 329
           V+V   L+  ++ PL  +     + R     L ++E +  L  +P PE A P        
Sbjct: 303 VLVNTYLLQLYV-PLNFLGM---VYREVKQGLVDMEVLFGLIDRP-PEVADPANAADLVV 357

Query: 330 -GGAINLQGVSLRYNPTGPDVLQNVNLHIPAGSMTAVIGASGSGKTSLMRLIARFFDTTE 388
            GGA+  +GV   YNP   +VL+ V+L IPAG   AV+G SG+GK++L RL+ RF+D T 
Sbjct: 358 RGGAVRFEGVRFAYNPER-EVLKGVSLEIPAGGTLAVVGHSGAGKSTLSRLLFRFYDVTG 416

Query: 389 GSVRIGGVDVRQMARASLTDTVSQVLQDTWLFQGSIADNIRIGKPDASDAEVLQAAHMAG 448
           G V I G D+R + +ASL   +  V QDT LF  +I  NI  G+P AS  EV +AA +A 
Sbjct: 417 GRVLIDGQDLRDVTQASLRRAIGIVPQDTVLFNDTIGYNIAYGRPGASRQEVERAARLAA 476

Query: 449 LGHTLERLRGGLDTSVGEGGAQLSGGERQRVTIARALIRQAPVLLVDEATAALDAENQAV 508
           +   ++ L+ G DT VGE G +LSGGE+QRV IAR +++   +L++DEAT+ALD+  +  
Sbjct: 477 IHDFVQSLKNGYDTQVGERGLKLSGGEKQRVAIARTILKDPAILILDEATSALDSHTERE 536

Query: 509 IAQTLHSLHGRCTLVVIAHQLSTVAMADHIVVLDAGQVVEQGTPATLRANGGHYARMLEQ 568
           I   L  +    T +VIAH+LSTV  AD I+VLD G+V E G+   L    G YA +  +
Sbjct: 537 IQGALRDVSRGRTTLVIAHRLSTVIDADRILVLDGGRVAESGSHDDLLRAEGLYAALWRK 596

Query: 569 RHAAN 573
           +  ++
Sbjct: 597 QQQSS 601