Pairwise Alignments

Query, 585 a.a., putative ABC transporter, permease/ATP-binding protein from Pseudomonas putida KT2440

Subject, 669 a.a., putative lipid A export ATP-binding/permease protein MsbA from Phaeobacter inhibens DSM 17395

 Score =  202 bits (513), Expect = 5e-56
 Identities = 121/282 (42%), Positives = 175/282 (62%), Gaps = 11/282 (3%)

Query: 288 DPLQDVASHVEILRGAHGQLQEIERILAAK-PLPEPASPHRPVGGA--INLQGVSLRYNP 344
           DP++ +AS     + A   ++ I+ ++ +   L  P +P  P  G   + L  V+LRY  
Sbjct: 347 DPMRRLASISGTWQAAAAAMERIKELMDSPIKLVSPENPVAPPKGLPEVALSDVTLRYGD 406

Query: 345 TGPDVLQNVNLHIPAGSMTAVIGASGSGKTSLMRLIARFFDTTEGSVRIGGVDVRQMARA 404
           +  DVL+ ++L   AG  TA++GASG+GK+++  L+ R  D  EGSV +GGV VR +   
Sbjct: 407 S--DVLRELSLVAEAGKTTALVGASGAGKSTIFNLLTRLVDPQEGSVTVGGVAVRDLDLD 464

Query: 405 SLTDTVSQVLQDTWLFQGSIADNIRIGKPDASDA---EVLQAAHMAGLGHTLERLRGGLD 461
            L    S V Q+  LF  ++ +NI +G+ D S+    EVL+A+H+A     L +L  GLD
Sbjct: 465 DLRGLFSVVTQEALLFDETLRENILLGRTDVSEERLQEVLEASHVADF---LPKLANGLD 521

Query: 462 TSVGEGGAQLSGGERQRVTIARALIRQAPVLLVDEATAALDAENQAVIAQTLHSLHGRCT 521
           T VG  G+ LSGG+RQRV IARAL+R  P+LL+DEAT+ALDA+++ V+ Q L  L G  T
Sbjct: 522 TLVGPRGSALSGGQRQRVVIARALLRDTPILLLDEATSALDAQSEKVVQQALEKLSGGRT 581

Query: 522 LVVIAHQLSTVAMADHIVVLDAGQVVEQGTPATLRANGGHYA 563
            +VIAH+LST+  AD IVV++ GQV++ GT   L   GG YA
Sbjct: 582 TLVIAHRLSTIRNADKIVVMERGQVMDHGTHEELLERGGIYA 623