Pairwise Alignments

Query, 585 a.a., putative ABC transporter, permease/ATP-binding protein from Pseudomonas putida KT2440

Subject, 609 a.a., ABC transporter ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  217 bits (552), Expect = 1e-60
 Identities = 164/590 (27%), Positives = 285/590 (48%), Gaps = 47/590 (7%)

Query: 14  PAWRRYLLMTVLYGVFSGLTISTLAPLMLHLLNSEIHAASAWLVVLAAGLTLCWAWRRQV 73
           P W  Y ++  L  +  G  IS L   +L      IH      V L AGL L +      
Sbjct: 45  PYWSVYEVLKEL--LLHGSKISELDSSVL------IHWGWVAFVGLVAGLLLLYG----A 92

Query: 74  EKAGISLAVAVLQGGRQHIGAQVAQLPLGWFTPDNTARLGHVITQGTMAVAQLPAHVLTP 133
             A    A  +L G R  +   + +L LG+    +T  +   + Q    +    AH +  
Sbjct: 93  LMASHVAAFRILYGLRIRLSGHIGRLSLGYLNGTSTGAIKKTMEQNVEKIENFVAHTIPD 152

Query: 134 LISSSVTPLVLLVALFILHPPLGLVALLALPALAAVLLFSARLGRRADHAFHQHFAAASQ 193
           L++   T +++ +  F L+  +  + ++ +   +  L F    G++A   F + +    +
Sbjct: 153 LVNVLATIVLMFIIFFSLNGWMAAICVVCI-VCSIGLQFMNFFGKKAKE-FTKIYYDTQE 210

Query: 194 RM----VEFAQAQSVLRAFNGEGGGTRLLAQSLERQRSSGM--------GLIIRASLSAL 241
           RM    V++ +   V++ F       R     +E  +S  +        G+I   + + L
Sbjct: 211 RMSASAVQYVRGMPVVKIFGQSVRSFRQFNSEIEAYKSYALRVCDTYQPGMI---AFTVL 267

Query: 242 LNSWAVQATFAALLVAAGLWFGDQAGGQAQDAVAVIVALVLVCRFIDPLQDV----ASHV 297
           LNS          ++  GL    +       A   +  +++    + P+  +    +S  
Sbjct: 268 LNS------LITFILPVGLLLLSRETQNIGLAAVYLFFIIMGPGVVSPIYKLMYLGSSTN 321

Query: 298 EILRGAHGQLQEIERILAAKPLPEPASPHRPVGGAINLQGVSLRYN----PTGPDVLQNV 353
           EI  G    ++ I+RI   + LPE A  H P    I  + VS  Y      T  + L+++
Sbjct: 322 EIDEG----VKRIDRIFDEQVLPETAVSHLPASYDIEFRHVSFAYENKAETTRTEALKDI 377

Query: 354 NLHIPAGSMTAVIGASGSGKTSLMRLIARFFDTTEGSVRIGGVDVRQMARASLTDTVSQV 413
           +   P G++TA++G SGSGK+++  LI RF+D +EG + IGG++++++A   L + VS V
Sbjct: 378 SFTAPQGAITALVGPSGSGKSTVANLIPRFWDVSEGEICIGGINIKEIATEDLMNLVSFV 437

Query: 414 LQDTWLFQGSIADNIRIGKPDASDAEVLQAAHMAGLGHTLERLRGGLDTSVGEGGAQLSG 473
            QD++LF  ++ +NIR+G   A+  +V++AA  A     +E L  G  T +G+ G  LSG
Sbjct: 438 FQDSFLFFDTLYENIRVGNTSATREQVIEAARAAQCHDFIESLPDGYHTRIGDKGVYLSG 497

Query: 474 GERQRVTIARALIRQAPVLLVDEATAALDAENQAVIAQTLHSLHGRCTLVVIAHQLSTVA 533
           GE QRV +ARA+++ AP+L++DEATA  D EN+  + Q +  L    T+++IAH+LS++ 
Sbjct: 498 GESQRVCVARAILKNAPILVLDEATAFADPENEYKMQQAIQQLIKNKTVIIIAHRLSSII 557

Query: 534 MADHIVVLDAGQVVEQGTPATLRANGGHYARMLEQRHAANGWRIGAPRVE 583
            A+ I+VL  G++V+ G    L    G Y RM +   +A  W++   + E
Sbjct: 558 SAEQILVLKEGKLVQSGRHEVLSKTDGVYKRMWDAYTSAFRWQLTIKKEE 607