Pairwise Alignments

Query, 303 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 293 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 99.4 bits (246), Expect = 9e-26
 Identities = 80/296 (27%), Positives = 142/296 (47%), Gaps = 12/296 (4%)

Query: 6   LRQLKYFVTTVEAGSVAEASRQLYIAQPSISTAIKSLEESFGVQLFIRHHAQGVSLTPSG 65
           ++ L+ F+T VE  +   A+++ +I QP++S  I+ LEES G  L IR++ Q V LT +G
Sbjct: 5   IKTLQCFLTLVETENFTRAAQKCFITQPTLSKIIQRLEESLGETLLIRNN-QKVELTQAG 63

Query: 66  KRFYAKTKSLLQMAHEFEQNALADNDTVAGQIDIGCFETVAPLYLPRLIAGFRQRYPGVD 125
           + F    + +L   H  +++    +   +G++ +G    ++ L +  L+  +R+RYPGV+
Sbjct: 64  QLFEHSAREILGQWHRLQEDMSNLSGLKSGRLRLGVCPMMSSLII-GLLTSYRKRYPGVE 122

Query: 126 IRLRDGEQQDLIQGLTAGTFDLAFLYDHDLDGTIEAEPLMPPQKPYVL---LPENHRFAS 182
           +++ +       Q L   + D+AF     L  T E E +  P   Y L   LPE H  A+
Sbjct: 123 LQMYEYGGFGCEQALLNNSLDIAFT---ALPTTHETELINQPLTKYPLLACLPEAHPLAA 179

Query: 183 QAQVSLRDLCPEPMILLDVAPSRTYFVS-LFNEMGLAPNIVFSSPSIEMVRGMVGQGFGF 241
           ++ +S +D  P P IL +   S    ++ L  + G+  NI F S   + +  MV    G 
Sbjct: 180 KSYLSWQDFEPYPFILYNEDFSLAKLINRLSRKAGVQLNIAFRSGQWDFLATMVEADMGL 239

Query: 242 SLLVTRPHSEYTYDGQRLAMLDIAEPVALSGLAAAWLKRVQLTKPAQLFVEFCREE 297
           ++L   P            +    +P     LA  W + + LT  A   +E  +++
Sbjct: 240 AIL---PEPICQKLSNSKLVFRPMQPALTWDLALIWRQNLPLTPAANALLELSKQK 292