Pairwise Alignments

Query, 303 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 315 a.a., LysR family transcriptional regulator from Herbaspirillum seropedicae SmR1

 Score =  103 bits (257), Expect = 5e-27
 Identities = 73/251 (29%), Positives = 123/251 (49%), Gaps = 17/251 (6%)

Query: 5   TLRQLKYFVTTVEAGSVAEASRQLYIAQPSISTAIKSLEESFGVQLFIRHHAQGVSLTPS 64
           TL +LKY V          A+   ++AQP++S AIK LE+  GV +F R   + VS+TP 
Sbjct: 2   TLTELKYIVAVAREKHFGHAAEACFVAQPTLSVAIKKLEDELGVVIFERGGTE-VSVTPL 60

Query: 65  GKRFYAKTKSLLQMAHEFEQNALADNDTVAGQIDIGCFETVAPLYLPRLIAGFRQRYPGV 124
           G +  A+ + +L+     ++ A  + D ++G + +G   T+ P  LP L+    +R P +
Sbjct: 61  GAQIVAQAERVLEQTAAIKEIANQNKDPLSGPLRLGIIYTIGPYLLPSLVKTMIERVPQM 120

Query: 125 DIRLRDGEQQDLIQGLTAGTFDLAFLYDHDLDGTIEAEPLMPPQKPYVLLPENHRFASQA 184
            + L++     LI+ L  G  D A +     +  +   PL   ++  V LP  H++A + 
Sbjct: 121 PLILQENFTTRLIELLRQGELDAAIMALPFPEHGLNVLPLY-DEEFMVALPRQHKWAERK 179

Query: 185 QVSLRDLCPEPMIL-----------LDVAPSRTYFVSLFNEMGLAPNIVFSSPSIEMVRG 233
           ++  R+L  E M+L           L+V P  + F +  N  G+A    F   S+E +R 
Sbjct: 180 EIDARELKSETMLLLGNGHCFRDQVLEVCPEMSRFST--NGDGIAR--TFEGSSLETIRH 235

Query: 234 MVGQGFGFSLL 244
           MV  G G ++L
Sbjct: 236 MVSSGIGVTVL 246