Pairwise Alignments

Query, 823 a.a., putative helicase, UvrD/REP family from Pseudomonas putida KT2440

Subject, 768 a.a., UvrD/REP helicase (NCBI) from Rhodospirillum rubrum S1H

 Score = 60.1 bits (144), Expect = 5e-13
 Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 17/112 (15%)

Query: 536 HLMIDEFQDVSPQIVSWLRACLAEIRRRGPAMHTGRHAQHSSLLCVGDDWQSIYGWRGSS 595
           ++++DE+QD +     WLR     +  RG          H ++ CVGDD QSIY WRG+ 
Sbjct: 237 YILVDEYQDTNVAQYLWLR-----LLARG----------HGNICCVGDDDQSIYSWRGAE 281

Query: 596 PKYFMEFTKAFPSPANTRVMLVDNYRCQQQVIDAAEHLVKGTPAIAGKKARA 647
               + F   FP    T V L  NYR    ++ AA  L++      GK  RA
Sbjct: 282 VGNILRFEADFPGA--TVVRLERNYRSTPTILAAASGLIRHNKGRLGKDLRA 331



 Score = 35.4 bits (80), Expect = 1e-05
 Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 16/88 (18%)

Query: 698 EHLQSVLHAEAALPAEQRRLRQLTYHSAKGLQADAVFMLGDCQYLTSSPYKNQVYRQAGL 757
           EH+  V+  EA   A +  +  +T H+AKGL+ D VF+ G         ++ +++     
Sbjct: 550 EHVSLVMDNEAR--ATEDAVTLMTLHAAKGLEFDTVFLPG---------WEEEIFPHRRA 598

Query: 758 GKAGDAQPFDTAQKEEVQRLAYVAVTRA 785
                A+       EE +RLAYV +TRA
Sbjct: 599 LDENGAEAL-----EEERRLAYVGLTRA 621