Pairwise Alignments

Query, 823 a.a., putative helicase, UvrD/REP family from Pseudomonas putida KT2440

Subject, 672 a.a., DNA helicase Rep from Klebsiella michiganensis M5al

 Score = 53.5 bits (127), Expect = 4e-11
 Identities = 52/223 (23%), Positives = 93/223 (41%), Gaps = 28/223 (12%)

Query: 458 IENLGLEVNNAVAAMSFPSGDSDALFFEALALYWKALEA-HLLDQSPPVMSYNRMFALFG 516
           I N   ++     A +   G+ D +F     LY   ++A ++LD    ++    +  L  
Sbjct: 139 ISNWKNDLKTPAQAAAGAKGERDRIFAHCYGLYDAHMKACNVLDFDDLIL----LPTLLL 194

Query: 517 ENNPENLHLLPDPLLRPLAHLMIDEFQDVSPQIVSWLRACLAEIRRRGPAMHTGRHAQHS 576
           + N E    + +     + +L++DE+QD +      ++  +                Q +
Sbjct: 195 QRNEE----VRERWQNKIRYLLVDEYQDTNTSQYELVKLLVG---------------QRA 235

Query: 577 SLLCVGDDWQSIYGWRGSSPKYFMEFTKAFPSPANTRVMLVDNYRCQQQVIDAAEHLVKG 636
               VGDD QSIY WRG+ P+  +  ++ F  PA   + L  NYR   +++ AA  L+  
Sbjct: 236 RFTVVGDDDQSIYSWRGARPQNLVLLSQDF--PALQVIKLEQNYRSSGRILKAANILIAN 293

Query: 637 TPAIAGKKARAS-GPAAELPGSPVKVFDRD-EAALGETLVEHY 677
            P +  K+  +  G   EL        D + E   GE +  H+
Sbjct: 294 NPHVFEKRLFSELGYGVELKVLSANNEDHEAERVAGELIAHHF 336



 Score = 35.8 bits (81), Expect = 8e-06
 Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 8/81 (9%)

Query: 145 VVAGAGAGKSTSLVLRILLLRHYLGYELDAMTVVTFTRESRKDFIKRLLQVFALWQINLQ 204
           V+AGAG+GK+  +  +I  L    GY+   +  VTFT ++ ++  +R+ Q        L 
Sbjct: 20  VLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAAREMKERVGQ-------TLG 72

Query: 205 PVQAREL-VRTFHSRILPLVR 224
             +AR L + TFH+  L +++
Sbjct: 73  RKEARGLMISTFHTLGLDIIK 93



 Score = 29.6 bits (65), Expect = 6e-04
 Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 17/73 (23%)

Query: 713 EQRRLRQLTYHSAKGLQADAVFMLGDCQYLTSSPYKNQVYRQAGLGKAGDAQPFDTAQKE 772
           E  +++ +T H++KGL+   V+++G  + L   P+++ +               D    +
Sbjct: 548 ETDQVQLMTLHASKGLEFPYVYLVGMEEGLL--PHQSSI---------------DEDNVD 590

Query: 773 EVQRLAYVAVTRA 785
           E +RLAYV +TRA
Sbjct: 591 EERRLAYVGITRA 603